<i>In Situ</i> Workload Estimation for Block Assignment and Duplication in Parallelization-Over-Data Particle Advection.

James Kress

Zhe Wang 0059 Kenneth Moreland Matthew Larsen James Kress Hank Childs Guan Li 0002 Guihua Shan David Pugmire <i>In Situ</i> Workload Estimation for Block Assignment and Duplication in Parallelization-Over-Data Particle Advection. 2025 44 Comput. Graph. Forum 3 https://doi.org/10.1111/cgf.70108 db/journals/cgf/cgf44.html#WangMLKCLSP25 streams/journals/cgf

James P. Ahrens Marco Arienti Utkarsh Ayachit Janine Bennett Roba Binyahib Ayan Biswas Peer-Timo Bremer Eric Brugger Roxana Bujack Hamish A. Carr Jieyang Chen Hank Childs Soumya Dutta Abdelilah Essiari Berk Geveci Cyrus Harrison Subhashis Hazarika Megan Hickman Fulp Petar Hristov Xuan Huang 0007 Joseph A. Insley Yuya Kawakami Chloe Keilers James Kress Matthew Larsen Dan Lipsa Meghanto Majumder Nicole Marsaglia Victor A. Mateevitsi Valerio Pascucci John Patchett Saumil Patel Steve Petruzza David Pugmire Silvio Rizzi 0001 David H. Rogers 0001 Oliver Rübel Jorge Sebastian Salinas Sudhanshu Sane Sergei Shudler Alexandra Stewart Karen C. Tsai Terece L. Turton Will Usher 0001 Zhe Wang 0059 Gunther H. Weber Corey Wetterer-Nelson Jonathan Woodring Abhishek Yenpure The ECP ALPINE project: In situ and post hoc visualization infrastructure and analysis capabilities for exascale. 32-51 2025 39 Int. J. High Perform. Comput. Appl. 1 https://doi.org/10.1177/10943420241286521 db/journals/ijhpca/ijhpca39.html#AhrensAABBBBBBCCCDEGHHF25 streams/journals/ijhpca

Zhe Wang 0059 Kenneth Moreland Matthew Larsen James Kress Hank Childs David Pugmire Parallelize Over Data Particle Advection: Participation, Ping Pong Particles, and Overhead. 7795-7808 2025 October 31 IEEE Trans. Vis. Comput. Graph. 10 https://doi.org/10.1109/TVCG.2025.3557453 db/journals/tvcg/tvcg31.html#WangMLKCP25 streams/journals/tvcg

James Kress Thomas Theußl Updating Inshimtu with Catalyst2 and Integrating an HPC MiniApp: Lessons Learned. 81-94 2025 ISC https://doi.org/10.1007/978-3-032-07612-0_7 conf/supercomputer/2025w db/conf/supercomputer/isc2025w.html#KressT25 streams/conf/supercomputer

Zhe Wang 0059 Kenneth Moreland Matthew Larsen James Kress Hank Childs David Pugmire Parallelize Over Data Particle Advection: Participation, Ping Pong Particles, and Overhead. 2024 abs/2410.09710 CoRR https://doi.org/10.48550/arXiv.2410.09710 db/journals/corr/corr2410.html#abs-2410-09710 streams/journals/corr

James Kress Shehzad Afzal Hari Prasad Dasari Sohaib Ghani Arjan Zamreeq Ayman Ghulam Ibrahim Hoteit Visualization Environment for Analyzing Extreme Rainfall Events: A Case Study. 25-32 2023 EnvirVis@EuroVis https://doi.org/10.2312/envirvis.20231103 conf/envirvis-ws/2023 db/conf/envirvis-ws/envirvis-ws2023.html#KressADGZGH23 James Kress Glendon Holst Hari Prasad Dasari Shehzad Afzal Ibrahim Hoteit Thomas Theußl Inshimtu - A Lightweight In Situ Visualization "Shim". 257-268 2023 ISC Workshops https://doi.org/10.1007/978-3-031-40843-4_19 conf/supercomputer/2023w db/conf/supercomputer/isc2023w.html#KressHDAHT23

Xin Liang 0001 Ben Whitney Jieyang Chen Lipeng Wan 0001 Qing Liu 0002 Dingwen Tao James Kress David Pugmire Matthew Wolf Norbert Podhorszki Scott Klasky MGARD+: Optimizing Multilevel Methods for Error-Bounded Scientific Data Reduction. 1522-1536 2022 71 IEEE Trans. Computers 7 https://doi.org/10.1109/TC.2021.3092201 https://www.wikidata.org/entity/Q114628917 db/journals/tc/tc71.html#LiangWCWLTKPWPK22

Ana Gainaru Lipeng Wan 0001 Ruonan Wang Eric Suchyta Jieyang Chen Norbert Podhorszki James Kress David Pugmire Scott Klasky Understanding the Impact of Data Staging for Coupled Scientific Workflows. 4134-4147 2022 33 IEEE Trans. Parallel Distributed Syst. 10 https://doi.org/10.1109/TPDS.2022.3179989 https://www.wikidata.org/entity/Q114628420 db/journals/tpds/tpds33.html#GainaruWWSCPKPK22

David Pugmire Caitlin Ross Nicholas Thompson James Kress Chuck Atkins Scott Klasky Berk Geveci Fides: A General Purpose Data Model Library for Streaming Data. 495-507 2021 ISC Workshops https://doi.org/10.1007/978-3-030-90539-2_34 conf/supercomputer/2021w db/conf/supercomputer/isc2021w.html#PugmireRTKAKG21

Jeremy Logan Mark Ainsworth Chuck Atkins Jieyang Chen Jong Choi 0001 Junmin Gu James Kress Greg Eisenhauer Berk Geveci William F. Godoy Mark Kim Tahsin M. Kurç Qing Liu 0002 Kshitij Mehta George Ostrouchov Norbert Podhorszki David Pugmire Eric Suchyta Nicholas Thompson Ozan Tugluk Lipeng Wan 0001 Ruonan Wang Ben Whitney Matthew Wolf Kesheng Wu Scott Klasky Extending the Publish/Subscribe Abstraction for High-Performance I/O and Data Management at Extreme Scale. 35-46 2020 43 IEEE Data Eng. Bull. 1 http://sites.computer.org/debull/A20mar/p35.pdf db/journals/debu/debu43.html#LoganAACCGKEGGK20

Hank Childs Sean Ahern James P. Ahrens Andrew C. Bauer Janine Bennett E. Wes Bethel Peer-Timo Bremer Eric Brugger Joseph Cottam Matthieu Dorier Soumya Dutta Jean M. Favre Thomas Fogal Steffen Frey Christoph Garth Berk Geveci William F. Godoy Charles D. Hansen Cyrus Harrison Bernd Hentschel 0001 Joseph A. Insley Christopher R. Johnson 0001 Scott Klasky Aaron Knoll James Kress Matthew Larsen Jay F. Lofstead Kwan-Liu Ma Preeti Malakar Jeremy S. Meredith Kenneth Moreland Paul A. Navrátil Patrick O'Leary Manish Parashar Valerio Pascucci John Patchett Tom Peterka Steve Petruzza Norbert Podhorszki David Pugmire Michel E. Rasquin Silvio Rizzi 0001 David H. Rogers 0001 Sudhanshu Sane Franz Sauer Robert Sisneros Han-Wei Shen Will Usher 0001 Rhonda Vickery Venkatram Vishwanath Ingo Wald Ruonan Wang Gunther H. Weber Brad Whitlock Matthew Wolf Hongfeng Yu 0001 Sean B. Ziegeler A terminology for in situ visualization and analysis systems. 2020 34 Int. J. High Perform. Comput. Appl. 6 https://doi.org/10.1177/1094342020935991 db/journals/ijhpca/ijhpca34.html#ChildsAABBBBBCD20

William F. Godoy Norbert Podhorszki Ruonan Wang Chuck Atkins Greg Eisenhauer Junmin Gu Philip E. Davis Jong Choi 0001 Kai Germaschewski Kevin A. Huck Axel Huebl Mark Kim James Kress Tahsin M. Kurç Qing Liu 0002 Jeremy Logan Kshitij Mehta George Ostrouchov Manish Parashar Franz Poeschel David Pugmire Eric Suchyta Keichi Takahashi Nick Thompson Seiji Tsutsumi Lipeng Wan 0001 Matthew Wolf Kesheng Wu Scott Klasky ADIOS 2: The Adaptable Input Output System. A framework for high-performance data management. 100561 2020 12 SoftwareX https://doi.org/10.1016/j.softx.2020.100561 https://www.wikidata.org/entity/Q115036775 db/journals/softx/softx12.html#GodoyPWAEGDCGHH20

Burlen Loring Matthew Wolf James Kress Sergei Shudler Junmin Gu Silvio Rizzi 0001 Jeremy Logan Nicola J. Ferrier E. Wes Bethel Improving Performance of M-to-N Processing and Data Redistribution in In Transit Analysis and Visualization. 35-45 2020 EGPGV@Eurographics/EuroVis https://doi.org/10.2312/pgv.20201073 conf/egpgv/2020 db/conf/egpgv/egpgv2020.html#LoringWKSGRLFB20 James Kress Matthew Larsen Jong Choi 0001 Mark Kim Matthew Wolf Norbert Podhorszki Scott Klasky Hank Childs David Pugmire Comparing Time-to-Solution for In Situ Visualization Paradigms at Scale. 22-26 2020 LDAV https://doi.org/10.1109/LDAV51489.2020.00009 conf/ldav/2020 db/conf/ldav/ldav2020.html#KressLCKWPKCP20 David Pugmire James Kress Jieyang Chen Hank Childs Jong Choi 0001 Dmitry Ganyushin Berk Geveci Mark Kim Scott Klasky Xin Liang 0001 Jeremy Logan Nicole Marsaglia Kshitij Mehta Norbert Podhorszki Caitlin Ross Eric Suchyta Nick Thompson Steven Walton 0001 Lipeng Wan 0001 Matthew Wolf Visualization as a Service for Scientific Data. 157-174 2020 SMC https://doi.org/10.1007/978-3-030-63393-6_11 conf/smc2/2020 db/conf/smc2/smc2020.html#PugmireKCCCGGKK20 James Kress Matthew Larsen Jong Choi 0001 Mark Kim Matthew Wolf Norbert Podhorszki Scott Klasky Hank Childs David Pugmire Opportunities for Cost Savings with In-Transit Visualization. 146-165 2020 ISC https://doi.org/10.1007/978-3-030-50743-5_8 conf/supercomputer/2020 db/conf/supercomputer/isc2020.html#KressLCKWPKCP20

Xin Liang 0001 Ben Whitney Jieyang Chen Lipeng Wan 0001 Qing Liu 0002 Dingwen Tao James Kress David Pugmire Matthew Wolf Norbert Podhorszki Scott Klasky MGARD+: Optimizing Multi-grid Based Reduction for Efficient Scientific Data Management. 2020 abs/2010.05872 CoRR https://arxiv.org/abs/2010.05872 db/journals/corr/corr2010.html#abs-2010-05872

James Kress Matthew Larsen Jong Choi 0001 Mark Kim Matthew Wolf Norbert Podhorszki Scott Klasky Hank Childs David Pugmire Comparing the Efficiency of In Situ Visualization Paradigms at Scale. 99-117 2019 ISC https://doi.org/10.1007/978-3-030-20656-7_6 conf/supercomputer/2019 db/conf/supercomputer/isc2019.html#KressLCKWPKCP19 Jong Youl Choi Choong-Seock Chang Julien Dominski Scott Klasky Gabriele Merlo Eric Suchyta Mark Ainsworth Bryce Allen Franck Cappello Michael Churchill Philip E. Davis Sheng Di Greg Eisenhauer Stéphane Ethier Ian T. Foster Berk Geveci Hanqi Guo 0001 Kevin A. Huck Frank Jenko Mark Kim James Kress Seung-Hoe Ku Qing Liu 0002 Jeremy Logan Allen D. Malony Kshitij Mehta Kenneth Moreland Todd S. Munson Manish Parashar Tom Peterka Norbert Podhorszki Dave Pugmire Ozan Tugluk Ruonan Wang Ben Whitney Matthew Wolf Chad Wood Coupling Exascale Multiphysics Applications: Methods and Lessons Learned. 442-452 2018 eScience https://doi.org/10.1109/eScience.2018.00133 https://doi.ieeecomputersociety.org/10.1109/eScience.2018.00133 conf/eScience/2018 db/conf/eScience/eScience2018.html#ChoiCDKMSAACCDD18 David Pugmire Abhishek Yenpure Mark Kim James Kress Robert Maynard Hank Childs Bernd Hentschel 0001 Performance-Portable Particle Advection with VTK-m. 45-55 2018 EGPGV@EuroVis https://doi.org/10.2312/pgv.20181094 conf/egpgv/2018 db/conf/egpgv/egpgv2018.html#PugmireYKKMC018 Scott Klasky Matthew Wolf Mark Ainsworth Chuck Atkins Jong Choi 0001 Greg Eisenhauer Berk Geveci William F. Godoy Mark Kim James Kress Tahsin M. Kurç Qing Liu 0002 Jeremy Logan Arthur B. Maccabe Kshitij Mehta George Ostrouchov Manish Parashar Norbert Podhorszki David Pugmire Eric Suchyta Lipeng Wan 0001 Ruonan Wang A View from ORNL: Scientific Data Research Opportunities in the Big Data Age. 1357-1368 2018 ICDCS https://doi.org/10.1109/ICDCS.2018.00136 https://doi.ieeecomputersociety.org/10.1109/ICDCS.2018.00136 conf/icdcs/2018 db/conf/icdcs/icdcs2018.html#KlaskyWAACEGGKK18 James Kress Jong Choi 0001 Scott Klasky Michael Churchill Hank Childs David Pugmire Binning Based Data Reduction for Vector Field Data of a Particle-In-Cell Fusion Simulation. 215-229 2018 ISC Workshops https://doi.org/10.1007/978-3-030-02465-9_15 conf/supercomputer/2018w db/conf/supercomputer/isc2018w.html#KressCKCCP18 Mark Kim James Kress Jong Choi 0001 Norbert Podhorszki Scott Klasky Matthew Wolf Kshitij Mehta Kevin A. Huck Berk Geveci Sujin Phillip Robert Maynard Hanqi Guo 0001 Tom Peterka Kenneth Moreland Choong-Seock Chang Julien Dominski Michael Churchill David Pugmire In Situ Analysis and Visualization of Fusion Simulations: Lessons Learned. 230-242 2018 ISC Workshops https://doi.org/10.1007/978-3-030-02465-9_16 conf/supercomputer/2018w db/conf/supercomputer/isc2018w.html#KimKCPKWMHGPMGP18

Kenneth Moreland Christopher M. Sewell William Usher 0001 Li-Ta Lo Jeremy S. Meredith David Pugmire James Kress Hendrik A. Schroots Kwan-Liu Ma Hank Childs Matthew Larsen Chun-Ming Chen Robert Maynard Berk Geveci VTK-m: Accelerating the Visualization Toolkit for Massively Threaded Architectures. 48-58 2016 36 IEEE Computer Graphics and Applications 3 https://doi.org/10.1109/MCG.2016.48 http://doi.ieeecomputersociety.org/10.1109/MCG.2016.48 https://www.wikidata.org/entity/Q38766964 db/journals/cga/cga36.html#MorelandSULMPKS16

James Kress Randy Michael Churchill Scott Klasky Mark Kim Hank Childs David Pugmire Preparing for In Situ Processing on Upcoming Leading-edge Supercomputers. 49-65 2016 3 Supercomput. Front. Innov. 4 https://doi.org/10.14529/jsfi160404 db/journals/superfri/superfri3.html#KressCKKCP16

David Pugmire James Kress Jong Youl Choi Scott Klasky Tahsin M. Kurç Michael Churchill Matthew Wolf Greg Eisenhauer Hank Childs Kesheng Wu Alexander Sim Junmin Gu Jonathan Low Visualization and Analysis for Near-Real-Time Decision Making in Distributed Workflows. 1007-1013 2016 IPDPS Workshops https://doi.org/10.1109/IPDPSW.2016.175 https://doi.ieeecomputersociety.org/10.1109/IPDPSW.2016.175 https://www.wikidata.org/entity/Q59359312 conf/ipps/2016w db/conf/ipps/ipdps2016w.html#PugmireKCKKCWEC16 James Kress David Pugmire Scott Klasky Hank Childs Visualization and Analysis Requirements for In Situ Processing for a Large-Scale Fusion Simulation Code. 45-50 2016 ISAV@SC https://doi.org/10.1109/ISAV.2016.014 https://doi.ieeecomputersociety.org/10.1109/ISAV.2016.014 http://dl.acm.org/citation.cfm?id=3018868 conf/sc/2016isav db/conf/sc/isav2016.html#KressPKC16 Matthew Larsen Cyrus Harrison James Kress David Pugmire Jeremy S. Meredith Hank Childs Performance modeling of in situ rendering. 276-287 2016 SC https://doi.org/10.1109/SC.2016.23 https://doi.ieeecomputersociety.org/10.1109/SC.2016.23 http://dl.acm.org/citation.cfm?id=3014936 conf/sc/2016 db/conf/sc/sc2016.html#LarsenHKPMC16 James Kress Erik Anderson Hank Childs A visualization pipeline for large-scale tractography data. 115-123 2015 LDAV https://doi.org/10.1109/LDAV.2015.7348079 https://doi.ieeecomputersociety.org/10.1109/LDAV.2015.7348079 conf/ldav/2015 db/conf/ldav/ldav2015.html#KressAC15 James Kress Scott Klasky Norbert Podhorszki Jong Youl Choi Hank Childs David Pugmire Loosely Coupled In Situ Visualization: A Perspective on Why It's Here to Stay. 1-6 2015 ISAV@SC https://doi.org/10.1145/2828612.2828623 conf/sc/2015isav db/conf/sc/isav2015.html#KressKPCCP15 Shehzad Afzal Sean Ahern James P. Ahrens Mark Ainsworth Bryce Allen Erik Anderson Marco Arienti Chuck Atkins Utkarsh Ayachit Andrew C. Bauer Janine Bennett E. Wes Bethel Roba Binyahib Ayan Biswas Peer-Timo Bremer Eric Brugger Roxana Bujack Franck Cappello Hamish A. Carr Choong-Seock Chang Chun-Ming Chen Jieyang Chen Hank Childs Jong Choi 0001Jong Youl Choi Michael ChurchillRandy Michael Churchill Joseph Cottam Hari Prasad Dasari Philip E. Davis Sheng Di Julien Dominski Matthieu Dorier Soumya Dutta Greg Eisenhauer Abdelilah Essiari Stéphane Ethier Jean M. Favre Nicola J. Ferrier Thomas Fogal Ian T. Foster Steffen Frey Megan Hickman Fulp Ana Gainaru Dmitry Ganyushin Christoph Garth Kai Germaschewski Berk Geveci Sohaib Ghani Ayman Ghulam William F. Godoy Junmin Gu Hanqi Guo 0001 Charles D. Hansen Cyrus Harrison Subhashis Hazarika Bernd Hentschel 0001 Glendon Holst Ibrahim Hoteit Petar Hristov Xuan Huang 0007 Kevin A. Huck Axel Huebl Joseph A. Insley Frank Jenko Chris R. Johnson 0001Christopher R. Johnson 0001 Yuya Kawakami Chloe Keilers Mark Kim Scott Klasky Aaron Knoll Seung-Hoe Ku Tahsin M. Kurç Matthew Larsen Guan Li 0002 Xin Liang 0001 Dan Lipsa Qing Liu 0002 Li-Ta Lo Jay F. Lofstead Jeremy Logan Burlen Loring Jonathan Low Kwan-Liu Ma Arthur B. Maccabe Meghanto Majumder Preeti Malakar Allen D. Malony Nicole Marsaglia Victor A. Mateevitsi Robert Maynard Kshitij Mehta Jeremy S. Meredith Gabriele Merlo Kenneth Moreland Todd S. Munson Paul A. Navrátil Patrick O'Leary George Ostrouchov Manish Parashar Valerio Pascucci John Patchett Saumil Patel Tom Peterka Steve Petruzza Sujin Phillip Norbert Podhorszki Franz Poeschel David PugmireDave Pugmire Michel E. Rasquin Silvio Rizzi 0001 David H. Rogers 0001 Caitlin Ross Oliver Rübel Jorge Sebastian Salinas Sudhanshu Sane Franz Sauer Hendrik A. Schroots Christopher M. Sewell Guihua Shan Han-Wei Shen Sergei Shudler Alex SimAlexander Sim Robert Sisneros Alexandra Stewart Eric Suchyta Keichi Takahashi Dingwen Tao Thomas Theußl Nicholas Thompson Nick Thompson Karen C. Tsai Seiji Tsutsumi Ozan Tugluk Terece L. Turton Will Usher 0001William Usher 0001 Rhonda Vickery Venkatram Vishwanath Ingo Wald Steven Walton 0001 Lipeng Wan 0001 Ruonan Wang Zhe Wang 0059 Gunther H. Weber Corey Wetterer-Nelson Brad Whitlock Ben Whitney Matthew Wolf Chad Wood Jonathan Woodring Kesheng Wu Abhishek Yenpure Hongfeng Yu 0001 Arjan Zamreeq Sean ZiegelerSean B. Ziegeler