A comparative study between vision transformers and CNNs in digital pathology.

Bernhard Stimpel

Luca Deininger Bernhard Stimpel Anil Yüce Samaneh Abbasi-Sureshjani Simon Schönenberger Paolo Ocampo Konstanty Korski Fabien Gaire A comparative study between vision transformers and CNNs in digital pathology. 2022 abs/2206.00389 CoRR https://doi.org/10.48550/arXiv.2206.00389 db/journals/corr/corr2206.html#abs-2206-00389

Bernhard Stimpel Multi-modal Medical Image Processing with Applications in Hybrid X-ray/Magnetic Resonance Imaging (Multimodale medizinische Bildverarbeitung mit Anwendungen in der hybriden R¨ontgen-/Magnetresonanzbildgebung) University of Erlangen-Nuremberg, Germany 2021 base-search.net (ftuniverlangen:oai:ub.uni-erlangen.de-opus:15697) https://opus4.kobv.de/opus4-fau/frontdoor/index/index/docId/15697 https://nbn-resolving.org/urn:nbn:de:bvb:29-opus4-156974 https://opus4.kobv.de/opus4-fau/files/15697/Dissertation_Bernhard_Stimpel.pdf https://www.base-search.net/Record/900bf62d92b3842947469b0190a1bb9d72221ebcb404368e07c1c1980da27a89

Elisabeth Hoppe Jens Wetzl Seung Su Yoon Mario Bacher Philipp Roser Bernhard Stimpel Alexander Preuhs Andreas Maier 0001 Deep Learning-Based ECG-Free Cardiac Navigation for Multi-Dimensional and Motion-Resolved Continuous Magnetic Resonance Imaging. 2105-2117 2021 40 IEEE Trans. Medical Imaging 8 https://doi.org/10.1109/TMI.2021.3073091 db/journals/tmi/tmi40.html#HoppeWYBRSPM21

Bernhard Stimpel Christopher Syben Franziska Schirrmacher Philip Hoelter Arnd Dörfler Andreas K. Maier Multi-Modal Deep Guided Filtering for Comprehensible Medical Image Processing. 1703-1711 2020 39 IEEE Trans. Medical Imaging 5 https://doi.org/10.1109/TMI.2019.2955184 https://www.wikidata.org/entity/Q91438981 db/journals/tmi/tmi39.html#StimpelSSHDM20

Christopher Syben Bernhard Stimpel Philipp Roser Arnd Dörfler Andreas K. Maier Known Operator Learning Enables Constrained Projection Geometry Conversion: Parallel to Cone-Beam for Hybrid MR/X-Ray Imaging. 3488-3498 2020 39 IEEE Trans. Medical Imaging 11 https://doi.org/10.1109/TMI.2020.2998179 https://www.wikidata.org/entity/Q98194609 db/journals/tmi/tmi39.html#SybenSRDM20

Philipp Roser Annette Birkhold Alexander Preuhs Bernhard Stimpel Christopher Syben Norbert Strobel Markus Kowarschik Rebecca Fahrig Andreas K. Maier Fully-Automatic CT Data Preparation for Interventional X-Ray Skin Dose Simulation. 125-130 2020 Bildverarbeitung für die Medizin https://doi.org/10.1007/978-3-658-29267-6_26 conf/bildmed/2020 db/conf/bildmed/bildmed2020.html#RoserBPSSSKFM20 Alexander Preuhs Michael Manhart 0001 Philipp Roser Bernhard Stimpel Christopher Syben Marios Psychogios Markus Kowarschik Andreas K. Maier Deep Autofocus with Cone-Beam CT Consistency Constraint. 169-174 2020 Bildverarbeitung für die Medizin https://doi.org/10.1007/978-3-658-29267-6_34 conf/bildmed/2020 db/conf/bildmed/bildmed2020.html#PreuhsMRSSPKM20 Franziska Schirrmacher Benedikt Lorch Bernhard Stimpel Thomas Köhler 0004 Christian Riess SR<sup>2</sup>: Super-Resolution With Structure-Aware Reconstruction. 533-537 2020 ICIP https://doi.org/10.1109/ICIP40778.2020.9191253 conf/icip/2020 db/conf/icip/icip2020.html#SchirrmacherLS020

Andreas K. Maier Christopher Syben Bernhard Stimpel Tobias Würfl Mathis Hoffmann Frank Schebesch Weilin Fu Leonid Mill Lasse Kling Silke H. Christiansen Learning with known operators reduces maximum error bounds. 373-380 2019 1 Nat. Mach. Intell. 8 https://doi.org/10.1038/s42256-019-0077-5 https://www.wikidata.org/entity/Q92582883 db/journals/natmi/natmi1.html#MaierSSWHSFMKC19

Christopher Syben Bernhard Stimpel Jonathan Lommen Tobias Würfl Arnd Dörfler Andreas K. Maier Abstract: Fan-to-Parallel Beam Conversion - Deriving Neural Network Architectures Using Precision Learning. 29 2019 Bildverarbeitung für die Medizin https://doi.org/10.1007/978-3-658-25326-4_9 conf/bildmed/2019 db/conf/bildmed/bildmed2019.html#SybenSLWDM19 Shahab Zarei Bernhard Stimpel Christopher Syben Andreas K. Maier User Loss A Forced-Choice-Inspired Approach to Train Neural Networks Directly by User Interaction. 92-97 2019 Bildverarbeitung für die Medizin https://doi.org/10.1007/978-3-658-25326-4_22 conf/bildmed/2019 db/conf/bildmed/bildmed2019.html#ZareiSSM19 Bernhard Stimpel Christopher Syben Franziska Schirrmacher Philip Hoelter Arnd Dörfler Andreas K. Maier Multi-Modal Super-Resolution with Deep Guided Filtering. 110-115 2019 Bildverarbeitung für die Medizin https://doi.org/10.1007/978-3-658-25326-4_25 conf/bildmed/2019 db/conf/bildmed/bildmed2019.html#StimpelSSHDM19 Alexander Preuhs Nishant Ravikumar Michael Manhart 0001 Bernhard Stimpel Elisabeth Hoppe Christopher Syben Markus Kowarschik Andreas K. Maier Maximum Likelihood Estimation of Head Motion Using Epipolar Consistency. 134-139 2019 Bildverarbeitung für die Medizin https://doi.org/10.1007/978-3-658-25326-4_29 conf/bildmed/2019 db/conf/bildmed/bildmed2019.html#PreuhsRMSHSKM19 Bernhard Stimpel Christopher Syben Tobias Würfl Katharina Breininger Jonathan M. Lommen Arnd Dörfler Andreas K. Maier Projection image-to-image translation in hybrid x-ray/MR imaging. 109492K 2019 Image Processing https://doi.org/10.1117/12.2512195 conf/miip/2019 db/conf/miip/miip2019.html#StimpelSWBLDM19

Christopher Syben Markus Michen Bernhard Stimpel Stephan Seitz Stefan B. Ploner Andreas K. Maier PYRO-NN: Python Reconstruction Operators in Neural Networks. 2019 abs/1904.13342 CoRR http://arxiv.org/abs/1904.13342 db/journals/corr/corr1904.html#abs-1904-13342

Andreas K. Maier Christopher Syben Bernhard Stimpel Tobias Würfl Mathis Hoffmann Frank Schebesch Weilin Fu Leonid Mill Lasse Kling Silke H. Christiansen Learning with Known Operators reduces Maximum Training Error Bounds. 2019 abs/1907.01992 CoRR http://arxiv.org/abs/1907.01992 db/journals/corr/corr1907.html#abs-1907-01992

Alexander Preuhs Michael Manhart 0001 Philipp Roser Bernhard Stimpel Christopher Syben Marios Psychogios Markus Kowarschik Andreas K. Maier Image Quality Assessment for Rigid Motion Compensation. 2019 abs/1910.04254 CoRR http://arxiv.org/abs/1910.04254 db/journals/corr/corr1910.html#abs-1910-04254

Bernhard Stimpel Christopher Syben Franziska Schirrmacher Philip Hoelter Arnd Dörfler Andreas K. Maier Multi-modal Deep Guided Filtering for Comprehensible Medical Image Processing. 2019 abs/1911.07731 CoRR http://arxiv.org/abs/1911.07731 db/journals/corr/corr1911.html#abs-1911-07731

Bernhard Stimpel Christopher Syben Tobias Würfl Katharina Breininger Philip Hoelter Arnd Dörfler Andreas K. Maier Projection-to-Projection Translation for Hybrid X-ray and Magnetic Resonance Imaging. 2019 abs/1911.08163 CoRR http://arxiv.org/abs/1911.08163 db/journals/corr/corr1911.html#abs-1911-08163

Alexander Preuhs Michael Manhart 0001 Philipp Roser Bernhard Stimpel Christopher Syben Marios Psychogios Markus Kowarschik Andreas Maier 0001 Deep autofocus with cone-beam CT consistency constraint. 2019 abs/1911.13162 CoRR http://arxiv.org/abs/1911.13162 db/journals/corr/corr1911.html#abs-1911-13162

Bernhard Stimpel Jens Wetzl Christoph Forman Michaela Schmidt Andreas K. Maier Mathias Unberath Automated Curved and Multiplanar Reformation for Screening of the Proximal Coronary Arteries in MR Angiography. 124 2018 4 J. Imaging 11 https://doi.org/10.3390/jimaging4110124 https://www.wikidata.org/entity/Q129050870 db/journals/jimaging/jimaging4.html#StimpelWFSMU18

Christopher Syben Bernhard Stimpel Jonathan Lommen Tobias Würfl Arnd Dörfler Andreas Maier 0001 Deriving Neural Network Architectures Using Precision Learning: Parallel-to-Fan Beam Conversion. 503-517 2018 GCPR https://doi.org/10.1007/978-3-030-12939-2_35 conf/dagm/2018 db/conf/dagm/gcpr2018.html#SybenSLWDM18

Bernhard Stimpel Christopher Syben Tobias Würfl Katharina Breininger Katrin Mentl Jonathan Lommen Arnd Dörfler Andreas K. Maier Projection image-to-image translation in hybrid X-ray/MR imaging. 2018 abs/1804.03955 CoRR http://arxiv.org/abs/1804.03955 db/journals/corr/corr1804.html#abs-1804-03955

Christopher Syben Bernhard Stimpel Jonathan Lommen Tobias Würfl Arnd Dörfler Andreas K. Maier Deriving Neural Network Architectures using Precision Learning: Parallel-to-fan beam Conversion. 2018 abs/1807.03057 CoRR http://arxiv.org/abs/1807.03057 db/journals/corr/corr1807.html#abs-1807-03057

Shahab Zarei Bernhard Stimpel Christopher Syben Andreas K. Maier User Loss - A Forced-Choice-Inspired Approach to Train Neural Networks directly by User Interaction. 2018 abs/1807.09303 CoRR http://arxiv.org/abs/1807.09303 db/journals/corr/corr1807.html#abs-1807-09303

Patrick Löber Bernhard Stimpel Christopher Syben Andreas K. Maier Hendrik Ditt Peter Schramm Boy Raczkowski André Kemmling Automatic Thrombus Detection in Non-enhanced Computed Tomography Images in Patients With Acute Ischemic Stroke. 125-129 2017 VCBM https://doi.org/10.2312/vcbm.20171245 conf/vcbm/2017 db/conf/vcbm/vcbm2017.html#LoberSSMDSRK17

Christopher Syben Bernhard Stimpel Katharina Breininger Tobias Würfl Rebecca Fahrig Arnd Dörfler Andreas K. Maier A Deep Learning Approach for Reconstruction Filter Kernel Discretization. 2017 abs/1710.06287 CoRR http://arxiv.org/abs/1710.06287 db/journals/corr/corr1710.html#abs-1710-06287

Bernhard Stimpel Christopher Syben Tobias Würfl Katrin Mentl Arnd Dörfler Andreas K. Maier MR to X-Ray Projection Image Synthesis. 2017 abs/1710.07498 CoRR http://arxiv.org/abs/1710.07498 db/journals/corr/corr1710.html#abs-1710-07498

Samaneh Abbasi-Sureshjani Mario Bacher Annette Birkhold Katharina Breininger Silke H. Christiansen Luca Deininger Hendrik Ditt Arnd Dörfler Rebecca Fahrig Christoph Forman Weilin Fu Fabien Gaire Philip Hoelter Mathis Hoffmann Elisabeth Hoppe André Kemmling Lasse Kling Thomas Köhler 0004 Konstanty Korski Markus Kowarschik Patrick Löber Jonathan LommenJonathan M. Lommen Benedikt Lorch Andreas K. MaierAndreas Maier 0001 Michael Manhart 0001 Katrin Mentl Markus Michen Leonid Mill Paolo Ocampo Stefan B. Ploner Alexander Preuhs Marios Psychogios Boy Raczkowski Nishant Ravikumar Christian Riess Philipp Roser Frank Schebesch Franziska Schirrmacher Michaela Schmidt Simon Schönenberger Peter Schramm Stephan Seitz Norbert Strobel Christopher Syben Mathias Unberath Jens Wetzl Tobias Würfl Seung Su Yoon Anil Yüce Shahab Zarei