MOSAIK: Multi-Origin Spatial Transcriptomics Analysis and Integration Kit.

Anthony Baptista

Anthony Baptista Diane Cruiziat Rosamond Nuamah Ciro Chiappini Anita Grigoriadis MOSAIK: Multi-Origin Spatial Transcriptomics Analysis and Integration Kit. 8795 2026 January 11 J. Open Source Softw. 117 https://doi.org/10.21105/joss.08795 db/journals/jossw/jossw11.html#BaptistaCNCG26 streams/journals/jossw

Gregory Verghese Anthony Baptista Chima Eke Holly Rafique Mengyuan Li Fathima Mohamed Ananya Bhalla Lucy Ryan Michael Pitcher Enrico Parisini Concetta Piazzese Liz Ing-Simmons Anita Grigoriadis PySlyde: A Lightweight, Open-Source Toolkit for Pathology Preprocessing. 2025 November abs/2511.05183 CoRR https://doi.org/10.48550/arXiv.2511.05183 db/journals/corr/corr2511.html#abs-2511-05183 streams/journals/corr

Anthony Baptista Galadriel Brière Anaïs Baudot Random walk with restart on multilayer networks: from node prioritisation to supervised link prediction and beyond. 70 2024 December 25 BMC Bioinform. 1 https://doi.org/10.1186/s12859-024-05683-z db/journals/bmcbi/bmcbi25.html#BaptistaBB24

Anthony Baptista Alessandro Barp Tapabrata Chakraborti Chris Harbron Ben D. MacArthur Christopher R. S. Banerji Deep Learning as Ricci Flow. 2024 abs/2404.14265 CoRR https://doi.org/10.48550/arXiv.2404.14265 db/journals/corr/corr2404.html#abs-2404-14265

Anthony Baptista Marta Niedostatek Jun Yamamoto Ben D. MacArthur Jürgen Kurths Rubén J. Sánchez-García Ginestra Bianconi Mining higher-order triadic interactions. 2024 abs/2404.14997 CoRR https://doi.org/10.48550/arXiv.2404.14997 db/journals/corr/corr2404.html#abs-2404-14997

Anthony Baptista Rubén J. Sánchez-García Anaïs Baudot Ginestra Bianconi Zoo Guide to Network Embedding. 2023 abs/2305.03474 CoRR https://doi.org/10.48550/arXiv.2305.03474 db/journals/corr/corr2305.html#abs-2305-03474

Anthony Baptista Aitor González Anaïs Baudot Universal Multilayer Network Exploration by Random Walk with Restart. 2021 abs/2107.04565 CoRR https://arxiv.org/abs/2107.04565 db/journals/corr/corr2107.html#abs-2107-04565

Christopher R. S. Banerji Alessandro Barp Anaïs Baudot Ananya Bhalla Ginestra Bianconi Galadriel Brière Tapabrata Chakraborti Ciro Chiappini Diane Cruiziat Chima Eke Aitor González Anita Grigoriadis Chris Harbron Liz Ing-Simmons Jürgen Kurths Mengyuan Li Ben D. MacArthur Fathima Mohamed Marta Niedostatek Rosamond Nuamah Enrico Parisini Concetta Piazzese Michael Pitcher Holly Rafique Lucy Ryan Rubén J. Sánchez-García Gregory Verghese Jun Yamamoto