PCdare software registers 3D back surface with biplanar radiographs: application to patients with scoliosis.

William R. Taylor

Mirko Kaiser Martin Bertsch Christoph J. Laux Sabrina Catanzaro Tobia Brusa Marco Wyss Volker M. Koch William R. Taylor Sasa Cukovic PCdare software registers 3D back surface with biplanar radiographs: application to patients with scoliosis. 2025 7 Frontiers Digit. Health https://doi.org/10.3389/fdgth.2025.1682398 db/journals/fdgth/fdgth7.html#KaiserBLCBWKTC25 streams/journals/fdgth

Jinhao Wang Florian Vogl Pascal Schütz Sasa Cukovic William R. Taylor Veriserum: A Dual-Plane Fluoroscopic Dataset with Knee Implant Phantoms for Deep Learning in Medical Imaging. 645-654 2025 MICCAI (13) https://doi.org/10.1007/978-3-032-05169-1_62 conf/miccai/2025-13 db/conf/miccai/miccai2025-13.html#WangVSCT25 streams/conf/miccai

Jinhao Wang Florian Vogl Pascal Schütz Sasa Cukovic William R. Taylor Veriserum: A dual-plane fluoroscopic dataset with knee implant phantoms for deep learning in medical imaging. 2025 September abs/2509.05483 CoRR https://doi.org/10.48550/arXiv.2509.05483 db/journals/corr/corr2509.html#abs-2509-05483 streams/journals/corr

Mirko Kaiser Tobia Brusa Stefan Fiechter Martin Bertsch Marco Wyss Sasa Cukovic William R. Taylor Volker M. Koch Method for Parametric Evaluation of 3-D Surface Imaging Systems for Applications With Moving Objects. 1-8 2024 73 IEEE Trans. Instrum. Meas. https://doi.org/10.1109/TIM.2024.3373077 db/journals/tim/tim73.html#KaiserBFBWCTK24

Ariana Ortigas Vásquez Allan Maas Renate List Pascal Schütz William R. Taylor Thomas M. Grupp A Framework for Analytical Validation of Inertial-Sensor-Based Knee Kinematics Using a Six-Degrees-of-Freedom Joint Simulator. 348 2023 23 Sensors 1 https://doi.org/10.3390/s23010348 db/journals/sensors/sensors23.html#VasquezMLSTG23

Mirko Kaiser Tobia Brusa Marco Wyss Sasa Cukovic Martin Bertsch William R. Taylor Volker M. Koch Minimal Required Resolution to Capture the 3D Shape of the Human Back - A Practical Approach. 7808 2023 September 23 Sensors 18 https://doi.org/10.3390/s23187808 db/journals/sensors/sensors23.html#KaiserBWCBTK23

Kiran Kuruvithadam Marcel Menner William R. Taylor Melanie N. Zeilinger Lennart Stieglitz Marianne Schmid Daners Data-Driven Investigation of Gait Patterns in Individuals Affected by Normal Pressure Hydrocephalus. 6451 2021 21 Sensors 19 https://doi.org/10.3390/s21196451 db/journals/sensors/sensors21.html#KuruvithadamMTZ21

Sasa Cukovic Vanja Lukovic William R. Taylor Wolfgang Birkfellner Radu Emanuil Petruse Nenad Filipovic Correlation of Vertebral Absolute Axial Rotations in CAD 3D Models of Adolescent Idiopathic Scoliosis Non-Invasively Diagnosed. 316-320 2019 BIBE https://doi.org/10.1109/BIBE.2019.00063 conf/bibe/2019 db/conf/bibe/bibe2019.html#CukovicLTBPF19

William R. Taylor Algorithms for matching partially labelled sequence graphs. 24:1-24:22 2017 12 Algorithms Mol. Biol. 1 https://doi.org/10.1186/s13015-017-0115-y https://www.wikidata.org/entity/Q42363917 db/journals/almob/almob12.html#Taylor17

Mostafa Mohammadi Navrag B. Singh Marco Hitz Stefan Orter William R. Taylor Carlo Frigo Achieving ecological validity in mobility assessment: Validating a wearable sensor technology for comprehensive gait assessment. 1-5 2017 RTSI https://doi.org/10.1109/RTSI.2017.8065971 conf/rtsi/2017 db/conf/rtsi/rtsi2017.html#MohammadiSHOTF17

William R. Taylor An algorithm to parse segment packing in predicted protein contact maps. 17 2016 11 Algorithms Mol. Biol. https://doi.org/10.1186/s13015-016-0080-x https://www.wikidata.org/entity/Q30389649 db/journals/almob/almob11.html#Taylor16

William R. Taylor Reduction, alignment and visualisation of large diverse sequence families. 300 2016 17 BMC Bioinform. https://doi.org/10.1186/s12859-016-1059-9 https://www.wikidata.org/entity/Q36093003 db/journals/bmcbi/bmcbi17.html#Taylor16

William R. Taylor Steric exclusion and constraint satisfaction in multi-scale coarse-grained simulations. 297-312 2016 64 Comput. Biol. Chem. https://doi.org/10.1016/j.compbiolchem.2016.06.007 https://www.wikidata.org/entity/Q42327345 db/journals/candc/candc64.html#Taylor16

Florian Schellenberg Katja Oberhofer William R. Taylor Silvio René Lorenzetti Review of Modelling Techniques for <i>In Vivo</i> Muscle Force Estimation in the Lower Extremities during Strength Training. 483921:1-483921:12 2015 2015 Comput. Math. Methods Medicine https://doi.org/10.1155/2015/483921 https://www.wikidata.org/entity/Q26784628 db/journals/cmmm/cmmm2015.html#SchellenbergOTL15

Michael I. Sadowski William R. Taylor Evolutionary inaccuracy of pairwise structural alignments. 1209-1215 2012 28 Bioinform. 9 https://doi.org/10.1093/bioinformatics/bts103 https://www.wikidata.org/entity/Q35916733 db/journals/bioinformatics/bioinformatics28.html#SadowskiT12

Zoe Katsimitsoulia William R. Taylor Coarse-Grained Simulation of Myosin-V Movement. 2012 2012 Comput. Math. Methods Medicine https://doi.org/10.1155/2012/781456 https://www.wikidata.org/entity/Q30417695 db/journals/cmmm/cmmm2012.html#KatsimitsouliaT12 781456:1-781456:15

Siv Midtun Hollup Michael I. Sadowski Inge Jonassen William R. Taylor Exploring the limits of fold discrimination by structural alignment: A large scale benchmark using decoys of known fold. 174-188 2011 35 Comput. Biol. Chem. 3 https://doi.org/10.1016/j.compbiolchem.2011.04.008 https://www.wikidata.org/entity/Q30404222 db/journals/candc/candc35.html#HollupSJT11

Michael I. Sadowski Katarzyna Maksimiak William R. Taylor Direct correlation analysis improves fold recognition. 323-332 2011 35 Comput. Biol. Chem. 5 https://doi.org/10.1016/j.compbiolchem.2011.08.002 https://www.wikidata.org/entity/Q35700487 db/journals/candc/candc35.html#SadowskiMT11

William R. Taylor Zoe Katsimitsoulia Alexei Poliakov Simulation of Cell Movement and Interaction. 91-110 2011 9 J. Bioinform. Comput. Biol. 1 https://doi.org/10.1142/S0219720011005318 https://www.wikidata.org/entity/Q39590458 db/journals/jbcb/jbcb9.html#TaylorKP11

William R. Taylor Zoe Katsimitsoulia A soft collision detection algorithm for simple Brownian dynamics. 1-10 2010 34 Comput. Biol. Chem. 1 https://doi.org/10.1016/j.compbiolchem.2009.11.003 https://www.wikidata.org/entity/Q51614207 db/journals/candc/candc34.html#TaylorK10

Zoe Katsimitsoulia William R. Taylor A hierarchic collision detection algorithm for simple Brownian dynamics. 71-79 2010 34 Comput. Biol. Chem. 2 https://doi.org/10.1016/j.compbiolchem.2010.01.001 https://www.wikidata.org/entity/Q51716253 db/journals/candc/candc34.html#KatsimitsouliaT10

Ben Grainger Michael I. Sadowski William R. Taylor Re-Evaluating the "Rules" of Protein Topology. 1371-1384 2010 17 J. Comput. Biol. 10 https://doi.org/10.1089/cmb.2009.0265 https://www.wikidata.org/entity/Q51677541 db/journals/jcb/jcb17.html#GraingerST10

Vijayalakshmi Chelliah William R. Taylor Functional site prediction selects correct protein models. 2008 9 BMC Bioinform. S-1 https://doi.org/10.1186/1471-2105-9-S1-S13 https://www.wikidata.org/entity/Q30368051 db/journals/bmcbi/bmcbi9S.html#ChelliahT08

William R. Taylor Protein knots and fold complexity: Some new twists. 151-162 2007 31 Comput. Biol. Chem. 3 https://doi.org/10.1016/j.compbiolchem.2007.03.002 https://www.wikidata.org/entity/Q30361659 db/journals/candc/candc31.html#Taylor07

Inge Jonassen Daniel Klose William R. Taylor Protein model refinement using structural fragment tessellation. 360-366 2006 30 Comput. Biol. Chem. 5 https://doi.org/10.1016/j.compbiolchem.2006.08.002 https://www.wikidata.org/entity/Q51933249 db/journals/candc/candc30.html#JonassenKT06

Jakob Vesterstrøm William R. Taylor Flexible Secondary Structure Based Protein Structure Comparison Applied to the Detection of Circular Permutation. 43-63 2006 13 J. Comput. Biol. 1 https://doi.org/10.1089/cmb.2006.13.43 https://www.wikidata.org/entity/Q30352923 db/journals/jcb/jcb13.html#VesterstromT06

Kuang Lin Victor A. Simossis William R. Taylor Jaap Heringa A simple and fast secondary structure prediction method using hidden neural networks. 152-159 2005 21 Bioinform. 2 https://doi.org/10.1093/bioinformatics/bth487 https://www.wikidata.org/entity/Q48523184 db/journals/bioinformatics/bioinformatics21.html#LinSTH05

William R. Taylor Modelling molecular stability in the RNA world. 259-272 2005 29 Comput. Biol. Chem. 4 https://doi.org/10.1016/j.compbiolchem.2005.04.009 https://www.wikidata.org/entity/Q56899535 db/journals/candc/candc29.html#Taylor05

Ingvar Eidhammer Inge Jonassen William R. Taylor Protein bioinformatics - an algorithmic approach to sequence and structure analysis. I-XVIII, 1-355 Wiley 2004 978-0-470-84839-5

William R. Taylor A molecular model for transcription in the RNA world based on the ribosome large subunit. 313-319 2004 28 Comput. Biol. Chem. 5-6 https://doi.org/10.1016/j.compbiolchem.2004.09.008 https://www.wikidata.org/entity/Q51983795 db/journals/candc/candc28.html#Taylor04

William R. Taylor Bing Xiao 0007 Steven J. Gamblin Kuang Lin A knot or not a knot? SETting the record 'straight' on proteins. 11-15 2003 27 Comput. Biol. Chem. 1 https://doi.org/10.1016/S1476-9271(02)00099-3 https://www.wikidata.org/entity/Q52014607 db/journals/candc/candc27.html#TaylorXGL03

Kuang Lin Jens Kleinjung William R. Taylor Jaap Heringa Testing homology with Contact Accepted mutatiOn (CAO): a contact-based Markov model of protein evolution. 93-102 2003 27 Comput. Biol. Chem. 2 https://doi.org/10.1016/S1476-9271(03)00022-7 https://www.wikidata.org/entity/Q52013708 db/journals/candc/candc27.html#LinKTH03

William R. Taylor Robin E. J. Munro Kjell Petersen Robert P. Bywater Ab initio modelling of the N-terminal domain of the secretin receptors. 103-114 2003 27 Comput. Biol. Chem. 2 https://doi.org/10.1016/S1476-9271(03)00020-3 https://www.wikidata.org/entity/Q44487881 db/journals/candc/candc27.html#TaylorMPB03

Darrell Conklin Inge Jonassen Rein Aasland William R. Taylor Association of nucleotide patterns with gene function classes: application to human 3' untranslated sequences. 182-189 2002 18 Bioinform. 1 db/journals/bioinformatics/bioinformatics18.html#ConklinJAT02 https://doi.org/10.1093/bioinformatics/18.1.182 https://www.wikidata.org/entity/Q48319445

Inge Jonassen Ingvar Eidhammer Darrell Conklin William R. Taylor Structure motif discovery and mining the PDB. 362-367 2002 18 Bioinform. 2 db/journals/bioinformatics/bioinformatics18.html#JonassenECT02 https://doi.org/10.1093/bioinformatics/18.2.362 https://www.wikidata.org/entity/Q43887996

Kuang Lin Alex C. W. May William R. Taylor Threading Using Neural nEtwork (TUNE): the measure of protein sequence-structure compatibility. 1350-1357 2002 18 Bioinform. 10 db/journals/bioinformatics/bioinformatics18.html#LinMT02 https://doi.org/10.1093/bioinformatics/18.10.1350 https://www.wikidata.org/entity/Q48618245

Kuang Lin Alex C. W. May William R. Taylor Amino Acid Substitution Matrices from an Artificial Neural Network Model. 471-481 2001 8 J. Comput. Biol. 5 db/journals/jcb/jcb8.html#LinMT01 https://doi.org/10.1089/106652701753216495 https://www.wikidata.org/entity/Q52052109

William R. Taylor Gisle Sælensminde Ingvar Eidhammer Multiple Protein Sequence Alignment using Double-dynamic Programming. 3-12 2000 24 Comput. Chem. 1 https://doi.org/10.1016/S0097-8485(00)80003-0 db/journals/candc/candc24.html#TaylorSE00

Ingvar Eidhammer Inge Jonassen William R. Taylor Structure Comparison and Structure Patterns. 685-716 2000 7 J. Comput. Biol. 5 db/journals/jcb/jcb7.html#EidhammerJT00 https://doi.org/10.1089/106652701446152 https://www.wikidata.org/entity/Q48742857

Inge Jonassen Ingvar Eidhammer Darrell Conklin William R. Taylor Structure Motif Discovery and Mining the PDB. 175-182 2000 conf/gcb/2000 German Conference on Bioinformatics db/conf/gcb/gcb2000.html#JonassenECT00

William R. Taylor Nigel P. Brown Iterated Sequence Databank Search Methods. 365-385 1999 23 Comput. Chem. 3-4 https://doi.org/10.1016/S0097-8485(99)00017-0 https://www.wikidata.org/entity/Q52209520 db/journals/candc/candc23.html#TaylorB99

András Aszódi William R. Taylor Hierarchic Inertial Projection: A Fast Distance Matrix Embedding Algorithm. 13-23 1997 21 Comput. Chem. 1 https://doi.org/10.1016/S0097-8485(96)00011-3 db/journals/candc/candc21.html#AszodiT97

Nigel P. Brown Christine A. Orengo William R. Taylor A Protein Structure Comparison Methodology. 359-380 1996 20 Comput. Chem. 3 https://doi.org/10.1016/0097-8485(95)00062-3 https://www.wikidata.org/entity/Q58073773 db/journals/candc/candc20.html#BrownOT96

Kerr Hatrick William R. Taylor Sequence Conservation and Correlation Measures in Protein Structure Prediction. 245-249 1994 18 Comput. Chem. 3 https://doi.org/10.1016/0097-8485(94)85019-4 https://www.wikidata.org/entity/Q30354120 db/journals/candc/candc18.html#HatrickT94

William R. Taylor Motif-Biased Protein Sequence Alignment. 297-310 1994 1 J. Comput. Biol. 4 db/journals/jcb/jcb1.html#Taylor94 https://doi.org/10.1089/cmb.1994.1.297 https://www.wikidata.org/entity/Q52383997

András Aszódi William R. Taylor Connection topology of proteins. 523-529 1993 9 Comput. Appl. Biosci. 5 db/journals/bioinformatics/bioinformatics9.html#AszodiT93 https://doi.org/10.1093/bioinformatics/9.5.523 https://www.wikidata.org/entity/Q52389650

William R. Taylor Protein Structure Prediction From Sequence. 117-122 1993 17 Comput. Chem. 2 https://doi.org/10.1016/0097-8485(93)85003-U db/journals/candc/candc17.html#Taylor93

David T. Jones William R. Taylor Janet M. Thornton The rapid generation of mutation data matrices from protein sequences. 275-282 1992 8 Comput. Appl. Biosci. 3 db/journals/bioinformatics/bioinformatics8.html#JonesTT92 https://doi.org/10.1093/bioinformatics/8.3.275 https://www.wikidata.org/entity/Q27860880

William R. Taylor Multiple sequence alignment by a pairwise algorithm. 81-87 1987 3 Comput. Appl. Biosci. 2 db/journals/bioinformatics/bioinformatics3.html#Taylor87 https://doi.org/10.1093/bioinformatics/3.2.81

Rein Aasland András Aszódi Martin Bertsch Wolfgang Birkfellner Nigel P. Brown Tobia Brusa Robert P. Bywater Sabrina Catanzaro Vijayalakshmi Chelliah Darrell Conklin Sasa Cukovic Marianne Schmid Daners Ingvar Eidhammer Stefan Fiechter Nenad Filipovic Carlo Frigo Steven J. Gamblin Ben Grainger Thomas M. Grupp Kerr Hatrick Jaap Heringa Marco Hitz Siv Midtun Hollup Inge Jonassen David T. Jones Mirko Kaiser Zoe Katsimitsoulia Jens Kleinjung Daniel Klose Volker M. Koch Kiran Kuruvithadam Christoph J. Laux Kuang Lin Renate List Silvio René Lorenzetti Vanja Lukovic Allan Maas Katarzyna Maksimiak Alex C. W. May Marcel Menner Mostafa Mohammadi Robin E. J. Munro Katja Oberhofer Christine A. Orengo Stefan Orter Kjell Petersen Radu Emanuil Petruse Alexei Poliakov Michael I. Sadowski Gisle Sælensminde Florian Schellenberg Pascal Schütz Victor A. Simossis Navrag B. Singh Lennart Stieglitz Janet M. Thornton Ariana Ortigas Vásquez Jakob Vesterstrøm Florian Vogl Jinhao Wang Marco Wyss Bing Xiao 0007 Melanie Nicole ZeilingerMelanie N. Zeilinger