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Commits on Nov 9, 2016

• fix modularity optimizer input format

  andrewwbutler

  committed
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Commits on Nov 4, 2016

• allow custom file location for mod opt intermediates, add error messages for Merging/AddSamples

  andrewwbutler

  committed
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Commits on Oct 18, 2016

• more informative error message for nb regression failures, set default min.diff.pct to -Inf in FindMarkers

  andrewwbutler

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Commits on Oct 13, 2016

• fix test

  andrewwbutler

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• fix nb/poisson DE tests

  andrewwbutler

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Commits on Oct 5, 2016

• documentation fix

  andrewwbutler

  committed
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Commits on Oct 4, 2016

• release version 1.4

  andrewwbutler

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Commits on Oct 2, 2016

• fix Windows compatibility issue with FindClusters

  andrewwbutler

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Commits on Sep 29, 2016

• Merge branch 'ryanrichholt-master'

  andrewwbutler

  committed
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• add numeric identifier for unnamed vectors > 2, recompile docs

  andrewwbutler

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• Merge branch 'master' of https://github.com/ryanrichholt/seurat into ryanrichholt-master

  andrewwbutler

  committed
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Commits on Sep 28, 2016

• Merge branch 'master' of https://github.com/ryanrichholt/seurat

  ryanrichholt

  committed
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• If data.dir is a named vector, cell names will be prefixed with data.dir name. Otherwise cell names will be cell barcodes.

  ryanrichholt

  committed
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• If data.dir is a named vector, cell names will be prefixed with data.dir name. Otherwise cell names will be cell barcodes.

  ryanrichholt

  committed
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Commits on Sep 27, 2016

• Read10X now accepts a vector of data directories. Optionally, this can be a named vector and the names will be appended to the cell barcodes. Single data dir functionality is preserved.

  ryanrichholt

  committed
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Commits on Sep 20, 2016

• add error checking for SNN plotting

  andrewwbutler

  committed
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• handle case where k.param > n.cells

  andrewwbutler

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Commits on Sep 19, 2016

• actually fix PC storing

  andrewwbutler

  committed
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• fix PC storing

  andrewwbutler

  committed
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Commits on Aug 28, 2016

• fix plot.SNN

  andrewwbutler

  committed
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• windows related fixes

  andrewwbutler

  committed
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Commits on Aug 26, 2016

• add parameter in FindClusters to force SNN reuse

  andrewwbutler

  committed
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Commits on Aug 23, 2016

• fix default PrintPCA behavior

  andrewwbutler

  committed
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• release version 1.3

  andrewwbutler

  committed
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Commits on Jul 12, 2016

• fix lfa dependency, install it directly from github

  andrewwbutler

  committed
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Commits on Jul 6, 2016

• fix jackStraw PC checking condition

  andrewwbutler

  committed
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Commits on Jun 23, 2016

• fix gene expression data retrieval

  andrewwbutler

  committed
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Commits on Jun 22, 2016

• add gene number error checking for jackStraw calculations

  andrewwbutler

  committed
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• add jackStraw PC error checking

  andrewwbutler

  committed
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Commits on Jun 11, 2016

• update jackStrawPlot, fix facet labelling

  andrewwbutler

  committed
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Commits on May 31, 2016

• Merge pull request satijalab#12 from andrewwbutler/master

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  andrewwbutler

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• include lfa dependency via bioconductor

  andrewwbutler

  committed
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Commits on Oct 7, 2015

• Bug fix in jackStrawPlot

  

  Rahul Satija

  committed
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Commits on May 21, 2015

• v1.2

  

  Rahul Satija

  committed
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• Added README

  

  Rahul Satija

  committed
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