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55 stars written in Jupyter Notebook
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Google Research

Jupyter Notebook 34,622 7,976 Updated Jan 3, 2025

Kolmogorov Arnold Networks

Jupyter Notebook 15,291 1,424 Updated Dec 11, 2024

State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.

Jupyter Notebook 13,737 3,259 Updated Aug 12, 2024

This repository contains implementations and illustrative code to accompany DeepMind publications

Jupyter Notebook 13,388 2,616 Updated Nov 18, 2024

A tiny scalar-valued autograd engine and a neural net library on top of it with PyTorch-like API

Jupyter Notebook 10,836 1,570 Updated Aug 8, 2024

Example 📓 Jupyter notebooks that demonstrate how to build, train, and deploy machine learning models using 🧠 Amazon SageMaker.

Jupyter Notebook 10,219 6,799 Updated Dec 23, 2024

This repository contains demos I made with the Transformers library by HuggingFace.

Jupyter Notebook 9,739 1,480 Updated Oct 21, 2024

Multi-Joint dynamics with Contact. A general purpose physics simulator.

Jupyter Notebook 8,498 862 Updated Jan 5, 2025

This is a Phi-3 book for getting started with Phi-3. Phi-3, a family of open sourced AI models developed by Microsoft. Phi-3 models are the most capable and cost-effective small language models (SL…

Jupyter Notebook 2,633 299 Updated Dec 12, 2024

NYU Deep Learning Spring 2021

Jupyter Notebook 1,587 281 Updated Sep 10, 2024

Biological foundation modeling from molecular to genome scale

Jupyter Notebook 1,230 151 Updated Dec 18, 2024

ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.

Jupyter Notebook 1,156 155 Updated Dec 9, 2024

Code for the ProteinMPNN paper

Jupyter Notebook 1,106 319 Updated Aug 14, 2024

Protein Graph Library

Jupyter Notebook 1,054 132 Updated Oct 23, 2024

Diffusion models of protein structure; trigonometry and attention are all you need!

Jupyter Notebook 527 61 Updated Dec 12, 2023
Jupyter Notebook 515 138 Updated Feb 18, 2019

Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design

Jupyter Notebook 509 154 Updated Aug 12, 2024
Jupyter Notebook 508 102 Updated Dec 17, 2023

Implementation of "Large Steps in Inverse Rendering of Geometry"

Jupyter Notebook 401 48 Updated Aug 22, 2023

Evolutionary couplings from protein and RNA sequence alignments

Jupyter Notebook 249 75 Updated Dec 3, 2024

Tutorials for Machine Learning on Graphs

Jupyter Notebook 212 55 Updated Jul 8, 2021

Protein-ligand structure prediction

Jupyter Notebook 207 18 Updated Jul 27, 2024
Jupyter Notebook 152 39 Updated Oct 27, 2021

CLASP - Contrastive Language-Aminoacid Sequence Pretraining

Jupyter Notebook 142 18 Updated Sep 17, 2021

Stanford University Rad229 Class Code: MRI Signals and Sequences

Jupyter Notebook 129 62 Updated Jun 26, 2023

Protein language model customized for antibodies

Jupyter Notebook 107 9 Updated Dec 31, 2024

Unconstrained lattice antibody-antigen bindings generator

Jupyter Notebook 102 20 Updated Jul 1, 2024

Minimal package to demonstrate good Python development habits

Jupyter Notebook 102 23 Updated Oct 28, 2024

Protein folding in Pymol

Jupyter Notebook 101 21 Updated Jul 30, 2024
Jupyter Notebook 96 12 Updated Dec 7, 2022
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