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Commits on Jun 21, 2017

• Addition of multiplicity correction for mutations in aneuploid regions

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Commits on Nov 14, 2016

• Color Palette Update in visualize.py

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Commits on May 11, 2016

• checking in SCHISM-1.1.2

  

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Commits on Mar 23, 2016

• Update HT.py

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• Update README.md

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• Update README.txt

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Commits on Feb 19, 2016

• Update CHANGES.txt

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• Update README.md

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• Update README.txt

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• Update setup.py

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• Update schism.yaml

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• Update schism.yaml

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Commits on Feb 18, 2016

• Update HT.py

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Commits on Feb 11, 2016

• Update schism.yaml

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• visualization of POV, addition of another absentMode to CE

  

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Commits on Feb 10, 2016

• adding cellularity visualization module

  

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Commits on Feb 8, 2016

• adding guidelines on how to use the clustering module

  

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• Update schism.yaml

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• improved error checking in config parsing module

  

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• Update schism.yaml

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• Update schism.yaml

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Commits on Feb 1, 2016

• Update schism.yaml

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• Update schism.yaml

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Commits on Jan 27, 2016

• adding updated schism configuration file

  

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• making clustering module backward compatible

  

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Commits on Jan 26, 2016

• fixing setup.py install requirements

  

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• fixing the sklearn requirement.

  

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• sklearn version requirement fixed

  

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• sklearn version requirement fixed

  

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• adding mutation clustering module (Affinity Propagation, DBSCAN, KMeans)

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Commits on Jan 2, 2016

• Update README.md

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• Update README.txt

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Commits on Dec 31, 2015

• updating citation in README.txt

  

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• specifiying matplotlib backend in case it is specified otherwise/missing in user config file

  

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Commits on Dec 17, 2015

• Update README.md

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