archive.yaml

vignettes:
  - name: atacseq_integration_vignette
    title: PBMC scATAC-seq Vignette
    versions: [v3.2, v3.1, v3.0]
  - name: cell_cycle_vignette
    title: Cell-Cycle Scoring and Regression
    versions: [v3.2, v3.1, v3.0, v2.4]
  - name: conversion_vignette
    title: Interoperability between single-cell object formats
    versions: [v3.2, v3.1, v3.0, v2.4]
  - name: de_vignette
    title: Differential expression testing
    versions: [v3.2, v3.1, v3.0, v2.4]
  - name: dim_reduction_vignette
    title: Seurat - Dimensional Reduction Vignette
    versions: [v3.2, v3.1, v3.0, v2.4]
  - name: future_vignette
    title: Parallelization in Seurat with future
    versions: [v3.2, v3.1, v3.0]
  - name: hashing_vignette
    title: Demultiplexing with hashtag oligos (HTOs)
    versions: [v3.2, v3.1, v3.0, v2.4]
  - name: immune_alignment
    title: "Tutorial: Integrating stimulated vs. control PBMC datasets to learn cell-
type specific responses"
    versions: [v3.2, v3.1, v3.0, v2.4]
  - name: integration
    title: Integration and Label Transfer
    versions: [v3.2, v3.1, v3.0]
  - name: interaction_vignette
    title: Seurat - Interaction Tips
    versions: [v3.2, v3.1, v3.0, v2.4]
  - name: mca
    title: Guided Clustering of the Microwell-seq Mouse Cell Atlas
    versions: [v3.2, v3.1, v3.0, v2.4]
  - name: mixscape
    title: Mixscape Vignette
    versions: [v3.2, v3.1]
  - name: multimodal_vignette
    title: Using Seurat with multi-modal data
    versions: [v3.2, v3.1, v3.0, v2.4]
  - name: pbmc3k_tutorial
    title: Guided tutorial --- 2,700 PBMCs
    versions: [v3.2, v3.1, v3.0, v2.4, v1.4]
  - name: sctransform_vignette
    title: Using sctransform in Seurat
    versions: [v3.2, v3.1, v3.0]
  - name: spatial_vignette
    title: Analysis, visualization, and integration of spatial datasets with Seurat
    versions: [v3.2]
  - name: visualization_vignette
    title: New data visualization methods in v3.0
    versions: [v3.2, v3.1, v3.0, v2.4]