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Stanford University
- https://orcid.org/0000-0001-6857-341X
- https://orcid.org/0000-0001-6857-341X
- @jnirsch
- in/jeff-nirschl-56700918
- https://www.researchgate.net/profile/Jeffrey-Nirschl
- https://profiles.stanford.edu/jeffrey-nirschl
Highlights
- Pro
Starred repositories
This is a PyTorch-based reimplementation of CrossFlow, as proposed in 'Flowing from Words to Pixels: A Framework for Cross-Modality Evolution'
BIOMEDICA: An Open Biomedical Image-Caption Archive, Dataset, and Vision-Language Models Derived from Scientific Literature
A Kubernetes deployable instance of GroundX for document parsing, storage, and search.
ColBERT: state-of-the-art neural search (SIGIR'20, TACL'21, NeurIPS'21, NAACL'22, CIKM'22, ACL'23, EMNLP'23)
Easily use and train state of the art late-interaction retrieval methods (ColBERT) in any RAG pipeline. Designed for modularity and ease-of-use, backed by research.
OTTR for making courses! This is a template repo that helps people write 1 course but publish it in three places. Rendered example: https://jhudatascience.org/OTTR_Template/
Beyond the Imitation Game collaborative benchmark for measuring and extrapolating the capabilities of language models
Deep probabilistic analysis of single-cell and spatial omics data
A Vision-Language Benchmark for Microscopy Understanding
TISSUE (Transcript Imputation with Spatial Single-cell Uncertainty Estimation) provides tools for estimating well-calibrated uncertainty measures for gene expression predictions in single-cell spat…
https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1
🌎 machine learning tutorials (mainly in Python3)
OpenVINO™ is an open-source toolkit for optimizing and deploying AI inference
This is a fully functioning implementation of the Spectral Normalized Gaussian Process in PyTorch.
Simple and efficient pytorch-native transformer text generation in <1000 LOC of python.
Library for Digital Pathology Image Processing
An open platform for training, serving, and evaluating large language models. Release repo for Vicuna and Chatbot Arena.
PyTorch package for the discrete VAE used for DALL·E.
Implementation of DALL-E 2, OpenAI's updated text-to-image synthesis neural network, in Pytorch
Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
Notebooks for learning deep learning
TDSP: Data science project template repository with standardized directory structure and document templates to support efficient project execution and collaboration.
[ICLR 2024] Fine-tuning LLaMA to follow Instructions within 1 Hour and 1.2M Parameters
An open-source framework for training large multimodal models.
O2VAE: a model for orientation-invariant representation learning (phenotyping) in cell biology data
A collection of libraries to optimise AI model performances
🧠 A study guide to learn about Transformers
An open source implementation of CLIP.