NAMESPACE

export('$.CELL_META')
export('circos.arrow')
export('circos.axis')
export('circos.clear')
export('circos.dendrogram')
export('circos.genomicDensity')
export('circos.genomicHeatmap')
export('circos.genomicIdeogram')
export('circos.genomicInitialize')
export('circos.genomicLabels')
export('circos.genomicLines')
export('circos.genomicLink')
export('circos.genomicPoints')
export('circos.genomicPosTransformLines')
export('circos.genomicRainfall')
export('circos.genomicRect')
export('circos.genomicText')
export('circos.genomicTrack')
export('circos.genomicTrackPlotRegion')
export('circos.info')
export('circos.initialize')
export('circos.initializeWithIdeogram')
export('circos.lines')
export('circos.link')
export('circos.nested')
export('circos.par')
export('circos.points')
export('circos.polygon')
export('circos.raster')
export('circos.rect')
export('circos.segments')
export('circos.text')
export('circos.track')
export('circos.trackHist')
export('circos.trackLines')
export('circos.trackPlotRegion')
export('circos.trackPoints')
export('circos.trackText')
export('circos.update')
export('circos.updatePlotRegion')
export('circos.xaxis')
export('circos.yaxis')
export('cytoband.col')
export('draw.sector')
export('get.all.sector.index')
export('get.all.track.index')
export('get.cell.meta.data')
export('get.current.chromosome')
export('get.current.sector.index')
export('get.current.track.index')
export('highlight.chromosome')
export('highlight.sector')
export('posTransform.default')
export('posTransform.text')
export('print.CELL_META')
export('read.chromInfo')
export('read.cytoband')
export('reverse.circlize')
export('set.current.cell')
export('show.index')
export(CELL_META)
export(add_transparency)
export(adjacencyList2Matrix)
export(chordDiagram)
export(chordDiagramFromDataFrame)
export(chordDiagramFromMatrix)
export(circlize)
export(col2value)
export(colorRamp2)
export(convert_height)
export(convert_length)
export(convert_x)
export(convert_y)
export(degree)
export(fontsize)
export(generateRandomBed)
export(genomicDensity)
export(getI)
export(rainfallTransform)
export(rand_color)
export(smartAlign)
export(uh)
export(ux)
export(uy)

S3method("$", CELL_META)
S3method(print, CELL_META)
import(graphics)
importFrom("GlobalOptions", setGlobalOptions)
importFrom("colorspace", HLS)
importFrom("colorspace", HSV)
importFrom("colorspace", LAB)
importFrom("colorspace", LUV)
importFrom("colorspace", RGB)
importFrom("colorspace", XYZ)
importFrom("colorspace", coords)
importFrom("colorspace", hex)
importFrom("colorspace", sRGB)
importFrom("grDevices", "dev.off", "pdf")
importFrom("grDevices", as.raster)
importFrom("grDevices", col2rgb)
importFrom("grDevices", rgb)
importFrom("grid", grid.pretty)
importFrom("methods", as)
importFrom("shape", Arrowhead)
importFrom("stats", rnorm)
importFrom("stats", runif)
importFrom("utils", download.file)
importFrom("utils", read.table, packageDescription)
importFrom("grDevices", "dev.cur", "dev.prev", "dev.set")