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Commits on Apr 18, 2017

• Make checkCountDepth count optional to prevent error:

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  skinnider

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Commits on Apr 9, 2017

• warnng if column seqdepth = 0. use of data.table for faster merging.

  

  Rhonda Bacher

  committed
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• warnng if column seqdepth = 0. use of data.table for faster merging.

  

  Rhonda Bacher

  committed
  19dea56

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Commits on Apr 8, 2017

• remove duplicated plot title

  rhondabacher

  committed
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Commits on Apr 6, 2017

• save plots to PDF more flexible, update vignette

  rhondabacher

  committed
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Commits on Apr 4, 2017

• edit documentation

  rhondabacher

  committed
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• Merge pull request rhondabacher#7 from golharam/patch-1

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  rhondabacher

  authored
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• Unique filename for SCnorm_normalizedData_FinalK

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  golharam

  authored
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Commits on Mar 29, 2017

• update vignette

  rhondabacher

  committed
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• update vignette

  rhondabacher

  committed
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• Delete SCnorm_1.1.0.tar.gz

  rhondabacher

  authored
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Commits on Mar 20, 2017

• update vignette

  

  Rhonda Bacher

  committed
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• spike-in option

  

  Rhonda Bacher

  committed
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• spike-in option

  

  Rhonda Bacher

  committed
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Commits on Mar 19, 2017

• update documentation

  rhondabacher

  committed
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• update documentation

  rhondabacher

  committed
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• option for within sample

  

  Rhonda Bacher

  committed
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Commits on Mar 16, 2017

• update vignette.

  rhondabacher

  committed
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• always save PDF in countDepth plot. update vignette.

  rhondabacher

  committed
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Commits on Mar 9, 2017

• update readme

  rhondabacher

  committed
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Commits on Mar 8, 2017

• save plot fix

  

  Rhonda Bacher

  committed
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• add dev.off() make sure plots saved

  rhondabacher

  committed
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Commits on Mar 7, 2017

• default rq to br method if fn (faster) fails

  

  Rhonda Bacher

  committed
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• default rq to br method if fn (faster) fails

  

  Rhonda Bacher

  committed
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Commits on Feb 23, 2017

• changes to SCnorm, dither option for data with many ties

  

  Rhonda Bacher

  committed
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Commits on Feb 19, 2017

• fix plot K

  

  Rhonda Bacher

  committed
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• fix plot K

  

  Rhonda Bacher

  committed
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• fix plot K

  

  Rhonda Bacher

  committed
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Commits on Feb 6, 2017

• make faster and allow threshold selection

  

  Rhonda Bacher

  committed
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Commits on Jan 5, 2017

• fixed condition ordering

  rhondabacher

  committed
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Commits on Dec 19, 2016

• update documentation

  rhondabacher

  committed
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• update documentation

  rhondabacher

  committed
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• fix plot sequence in initialEvalPlot

  rhondabacher

  committed
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• fix plot sequence in initialEvalPlot

  rhondabacher

  committed
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• fix plot sequence in initialEvalPlot

  rhondabacher

  committed
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