为GPT/GLM等LLM大语言模型提供实用化交互接口，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, m…

🧑‍🏫 60+ Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), ga…

阿布量化交易系统(股票，期权，期货，比特币，机器学习) 基于python的开源量化交易，量化投资架构

机器学习相关教程

手写实现李航《统计学习方法》书中全部算法

Official git repository for Biopython (originally converted from CVS)

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

✔️李沐 【动手学深度学习】课程学习笔记：使用pycharm编程，基于pytorch框架实现。

POT : Python Optimal Transport

A curated list of community detection research papers with implementations.

Single-cell analysis in Python. Scales to >1M cells.

TensorLy: Tensor Learning in Python.

A PyTorch implementation of "Graph Wavelet Neural Network" (ICLR 2019)

Fast Randomized PCA/SVD

《数据结构与算法之美》的学习笔记和python代码实现

Tensor Network Python (TeNPy)

Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

Source code for experiments in the papers "Complex Embeddings for Simple Link Prediction" (ICML 2016) and "Knowledge Graph Completion via Complex Tensor Factorization" (JMLR 2017).

复杂网络社区发现算法、评价指标、常用数据集整理

SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

Python framework for Systems Biology modeling

A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA

Supervised Pathway DEConvolution of InTerpretable Gene ProgRAms

Single Cell Analysis Pipelines

Python for Tensor Network: Tutorial. The lecturing vedios (in Chinese) can be found at https://space.bilibili.com/401005433

Code for generating Higher-order Network (HON) from data with higher-order dependencies

User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins

K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data

astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨

SPROD: Spatial expression profiling de-noising