Skip to content
View yimingfish's full-sized avatar
:octocat:
fixing bugs~
:octocat:
fixing bugs~

Highlights

  • Pro

Block or report yimingfish

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Stars

Nanopore

6 repositories

Visualise and analyse nanopore (ONT) raw signals

Python 111 3 Updated Jan 28, 2025

Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.

C 96 6 Updated Jan 21, 2025

Full-Length Alternative Isoform analysis of RNA

Python 216 73 Updated Feb 6, 2025

Prediction of RNA modifications and their stoichiometry from per-read features: current intensity, dwell time and trace (Begik*, Lucas* et al., Nature Biotech 2021)

Jupyter Notebook 23 11 Updated Dec 21, 2022

Long read production pipelines

Jupyter Notebook 143 24 Updated Feb 8, 2025

FPA NLR paper pipelines & notebooks

Jupyter Notebook 2 Updated Dec 12, 2020