SoupX/NAMESPACE at master · yolsan/SoupX · GitHub

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# Generated by roxygen2: do not edit by hand

S3method(print,SoupChannel)
S3method(print,SoupChannelList)
export(SoupChannel)
export(SoupChannelList)
export(adjustCounts)
export(calculateContaminationFraction)
export(createCleanedSeurat)
export(estimateSoup)
export(findCells)
export(identifyExpressingCells)
export(inferNonExpressedGenes)
export(interpolateCellContamination)
export(load10X)
export(plotCandidateMarkerGenes)
export(plotChangeMap)
export(plotChannelContamination)
export(plotMarkerDistribution)
export(plotMarkerMap)
export(plotSoupCorrelation)
export(quickMarkers)
export(strainCells)
import(ggplot2)
importFrom(Matrix,colSums)
importFrom(Matrix,rowSums)
importFrom(Matrix,sparseMatrix)
importFrom(Matrix,t)
importFrom(Seurat,CreateSeuratObject)
importFrom(Seurat,Read10X)
importFrom(Seurat,SetAssayData)
importFrom(grDevices,rainbow)
importFrom(methods,as)
importFrom(methods,is)
importFrom(stats,approx)
importFrom(stats,dpois)
importFrom(stats,lowess)
importFrom(stats,optimise)
importFrom(stats,p.adjust)
importFrom(stats,pbinom)
importFrom(stats,phyper)
importFrom(stats,ppois)
importFrom(stats,qbeta)
importFrom(stats,setNames)
importFrom(stats,spline)
importFrom(utils,data)
importFrom(utils,read.delim)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)