flash-cli

Command-line interface for the FLASH read merging algorithm implemented in Rust. This binary wraps the flash-lib crate to merge paired FASTQ reads using the same defaults as the original FLASH utility.

Usage

flash-cli input1.fq input2.fq --output-dir out --output-prefix merged

For all available options, run:

flash-cli --help

License

Released under the MIT license. See the repository root for details.