1 unstable release
Uses new Rust 2024
| new 0.0.2 | Feb 20, 2026 |
|---|
#24 in #run
9KB
222 lines
CFA Model Run Protocol (CFA-MRP)
Overview
MRP is a layered protocol for running computational disease models. It defines a standard interface between tooling and model code: a model is a function that accepts JSON and produces output.
The SDK handles config parsing, file staging, and runtime dispatch — so models stay simple.
General Disclaimer
General disclaimer This repository was created for use by CDC programs to collaborate on public health related projects in support of the CDC mission. GitHub is not hosted by the CDC, but is a third party website used by CDC and its partners to share information and collaborate on software. CDC use of GitHub does not imply an endorsement of any one particular service, product, or enterprise.
See also the longer Disclaimer and the Notices section below.
Developing the MRP library
Tasks
Common workflows are defined as
poe tasks
in pyproject.toml:
| Task | Command | Description |
|---|---|---|
poe test |
pytest |
Run tests |
poe lint |
ruff check . |
Lint Python |
poe typecheck |
ty check src |
Type check |
poe renewal |
mrp run ... |
Run renewal example |
Notices
Public Domain Standard Notice
This repository constitutes a work of the United States Government and is not subject to domestic copyright protection under 17 USC § 105. This repository is in the public domain within the United States, and copyright and related rights in the work worldwide are waived through the CC0 1.0 Universal public domain dedication. All contributions to this repository will be released under the CC0 dedication. By submitting a pull request you are agreeing to comply with this waiver of copyright interest.
License Standard Notice
The repository utilizes code licensed under the terms of the Apache Software License and therefore is licensed under ASL v2 or later.
This source code in this repository is free: you can redistribute it and/or modify it under the terms of the Apache Software License version 2, or (at your option) any later version.
This source code in this repository is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the Apache Software License for more details.
You should have received a copy of the Apache Software License along with this program. If not, see http://www.apache.org/licenses/LICENSE-2.0.html
The source code forked from other open source projects will inherit its license.
Privacy Standard Notice
This repository contains only non-sensitive, publicly available data and information. All material and community participation is covered by the Disclaimer and Code of Conduct. For more information about CDC's privacy policy, please visit http://www.cdc.gov/other/privacy.html.
Contributing Standard Notice
Anyone is encouraged to contribute to the repository by forking and submitting a pull request. (If you are new to GitHub, you might start with a basic tutorial.) By contributing to this project, you grant a world-wide, royalty-free, perpetual, irrevocable, non-exclusive, transferable license to all users under the terms of the Apache Software License v2 or later.
All comments, messages, pull requests, and other submissions received through CDC including this GitHub page may be subject to applicable federal law, including but not limited to the Federal Records Act, and may be archived. Learn more at http://www.cdc.gov/other/privacy.html.
Records Management Standard Notice
This repository is not a source of government records, but is a copy to increase collaboration and collaborative potential. All government records will be published through the CDC web site.
Dependencies
~1.5–2.5MB
~38K SLoC