Search Results for "python data analysis"
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Showing 363 open source projects for "python data analysis"
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miRge3
Comprehensive analysis of small RNA sequencing data
An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. -
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SMILI
Scientific Visualisation Made Easy
The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with... -
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Datapipe
Real-time, incremental ETL library for ML with record-level depend
Datapipe is a real-time, incremental ETL library for Python with record-level dependency tracking. Datapipe is designed to streamline the creation of data processing pipelines. It excels in scenarios where data is continuously changing, requiring pipelines to adapt and process only the modified data efficiently. This library tracks dependencies for each record in the pipeline, ensuring minimal and efficient data processing. -
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realwatermark
A Python application to add watermarks (text or image) to PDF files
A Python application to add watermarks (text or image) to PDF files, converts them into image and back to PDF with options for OCR and compression. -
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Quick 2d Plot
Program for live 2d graphical representation of data streams
Quick2dPlot, or q2d for short, is an open source minimalistic plotting program designed for live 2d graphical representation of data streams. The program may be useful for plotting output of different user's application programs, especially in case when the user wants to see a plot or a number of plots during calculations or a data acquisition process. The program is command-driven and uses no widgets. Q2d is written in C, it takes advantage of SDL2 library for plotting. Currently... -
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Astrape
Optical-packet node transceiver frequency allocation
In an optical network scenario which consists of multiple nodes (whiteboxes) at its edges and ROADMs in-between, the coherent transceiver average laser configuration time is improved. The process is evaluated according to a testbed setup. This is facilitated in the appropriate lab equipment (or via simulation when required). For that purpose, a software agent (Netconf server) residing at the whiteboxes, is developed receiving input from the Software-Defined Networking (SDN) packet... -
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MaxFEM
Software for electromagnetic simulation
MaxFem is an open software package for electromagnetic simulation by using finite element methods. The package can solve problems in electrostatics, direct current, magnetostatics and eddy-currents. Since version 0.4.0, MaxFEM requires Python 3. We have moved the installers to the MaxFEM website (see below). In order to improve MaxFEM, we will require you to fill out a simple form before downloading them. -
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Srilanka-Holidays
Sri Lankan official holidays open-source API & data
An open-source API to get Sri Lankan holidays and a list of Sri Lankan holidays in several file formats for easy integration with your applications. Holidays are updated every year and currently contains holidays starting from 2021. - Reliable and accurate local data updated every year - Available as both API and downloadable files in CSV, JSON, XML, ICS - Holiday categorizations (Public, Bank, Mercantile, Poya, etc.) -
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ED Software project contains several programs used (mostly) for processing gas-phase electron diffraction (GED) experimental data.
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Br-Gogo is a Brazilian open-source version of the Gogo Board project. Developed by CTI, a Brazilian research center. **<div class="sf-root" data-id="250926" data-badge="oss-users-love-us-white" style="width:125px"> <a href="https://sourceforge.net/projects/br-gogo/" target="_blank">Br-Gogo</a> </div>**
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Cinemagoer
Python package to retrieve and manage data of the IMDb
Cinemagoer is a Python package useful to retrieve and manage the data of the IMDb movie database about movies, people, characters and companies. Platform-independent, it can retrieve data from both the IMDb's web server and a local copy of the whole db. -
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EpiDoc: Epigraphic Documents in TEI XML
XML text markup for ancient documents
The EpiDoc Collaborative is developing specifications and tools for standards-based, digital publication and interchange of scholarly and educational editions of documentary and literary texts like inscriptions and papyri. The link below will take you to the EpiDoc home page on this site. -
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SBEVSL is a collaborative project between Dowling and RIT on the development of a Structural Biology Extensible Visualization Scripting Language, so that users can move freely among various molecular graphics tools, such as rasmol, pymol, raster3d, etc.
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hui
hewies user interface - 3D scientific visualisation tool
Python project with goal to provide FOSS library to extract, analyse and visualise data in a 3D fashion. The instance will connect to a data source, ods sheet, csv, sql DB, pyodbc the instance will analyse and/or transform the data to be presented to the visualisation functionality the instance will visualise the data in a 3D fashion, likely using third party FOSS -
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Filecatman
A file categorization management program.
A file categorization management program, designed to make sorting, categorizing and accessing data simple and easy. -
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OpenVCT
The Open-Source Virtual Clinical Trial Project
The OpenVCT project is designed to provide a common platform for performing Virtual Clinical Trials of medical imaging. OpenVCT provides tools for simulation of patient accrual and reader studies of medical imaging devices, simulating by simulating cohorts of patients and readers. OpenVCT uses common data standards, such as DICOM, to ensure inter-compatibility. -
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UniBas is a relational database application that tries to address recurring common problems in all database applications, such as displaying actual and consistent data, maintaining consistency in the underlying DB, etc.
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bioweb
polyglot language framework to analyze genetic data
polyglot framework using Python/C++/JavaScript to fast develop applications to analyze biological sequences -
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AICtools
Workflow and set of tools for Automated Imagery Classification
AICtools is a GIS workflow and set of tools to facilitate Automated Imagery Classification (AIC) and analysis of surface features over time. Allows bulk processing of large data sets, including automated metadata processing/filtering, compressed archive extraction and file manipulation, raster band compositing, pre-processing, mosaicking, clipping. Automates a subset of operations involved in classification of satellite imagery and the associated raster calculations used for time trend analysis. -
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TimothyDocs
Timothy is a cloud base storage system designed to document your work
Timothy is a cloud based documentation system. Timothy will document any endeavor because it will store not only the documents created during the project but also store information about those files. Like most storge schemes timothy creates a hierarchy of categories through which one may browse. Timothy displays information about the document or category as well as its name. This use of meta data explains the structure and content of the project to the user as he browses. Users... -
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Although mass spectrometry is well suited to identifying thousands of potential protein post-translational modifications (PTMs), it has historically been biased towards just a few. To measure the entire set of PTMs across diverse proteomes, software must overcome the dual challenges of covering enormous search spaces and distinguishing correct from incorrect spectrum interpretations. Here, we describe TagGraph, a computational tool that overcomes both challenges with an unrestricted...
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Scripts to assist blind people to read and write LaTeX. The current line of a file being edited is translated into speech and Braille output. This can be used by assistive technology such as screenreaders.
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The TRANSIMS Studio application is an integrated development environment for the TRansportation ANalysis and SIMulation System (TRANSIMS). Components include a run time environment to execute TRANSIMS in parallel, as well as a full featured GUI.
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Backuso
Backup software for your data to local and remote SSH systems
Backuso – pronounce like the opera singer ‘Caruso’ – is a software for routine and automated backups of your computer to either a local storage or a remote storage on an SSH server, or both. A local storage is anything accessible in the directory structure of your computer. Most of the time this will be a (large) hard drive, mounted at a convenient location. A remote storage is anything which is accessed on your network via the ssh protocol. This could be a NAS (Network Attached... -
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pysourceinfo
RTTI for Python Source and Binary Files
The 'pysourceinfo' package provides source information on Python runtime objects based on 'inspect', 'sys', 'os', and 'imp'. The covered objects include packages, modules, functions, methods, scripts, and classes by two views: - File System View - packages, modules, and linenumbers - based on files and paths - Runtime Object View - callables, classes, and containers - based on in-memory RTTI / introspection The supported platforms are: - Linux, BSD, Unix, OS-X, Cygwin, and...
