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2020 – today
- 2024
[j12]Bijia Chen, Chao Ren, Zhangyi Ouyang, Jingxuan Xu, Kang Xu, Yaru Li, Hejiang Guo, Xuemei Bai, Mengge Tian, Xiang Xu
, Yuyang Wang, Hao Li, Xiaochen Bo, Hebing Chen:
Stratifying TAD boundaries pinpoints focal genomic regions of regulation, damage, and repair. Briefings Bioinform. 25(4) (2024)- [j11]Ruiqing Wang, Chao Ren, Tian Gao, Hao Li, Xiaochen Bo, Dahai Zhu, Dan Zhang, Hebing Chen, Yong Zhang:
SEPDB: a database of secreted proteins. Database J. Biol. Databases Curation 2024 (2024) - [j10]Yuyang Wang, Yu Sun, Zeyu Liu, Bijia Chen, Hebing Chen, Chao Ren, Xuanwei Lin, Pengzhen Hu, Peiheng Jia, Xiang Xu, Kang Xu, Ximeng Liu, Hao Li, Xiaochen Bo:
Effectiveness of machine learning at modeling the relationship between Hi-C data and copy number variation. Quant. Biol. 12(3): 231-244 (2024) - 2023
- [j9]Junting Wang, Huan Tao, Hao Li, Xiaochen Bo, Hebing Chen:
3D genomic organization in cancers. Quant. Biol. 11(2): 109-121 (2023) - 2022
- [j8]Hao Li, Yu Sun, Hao Hong, Xin Huang, Huan Tao, Qiya Huang, Longteng Wang, Kang Xu, Jingbo Gan, Hebing Chen, Xiaochen Bo:
Inferring transcription factor regulatory networks from single-cell ATAC-seq data based on graph neural networks. Nat. Mach. Intell. 4(4): 389-400 (2022) - 2021
- [j7]Shuai Jiang, Hao Li, Hao Hong, Guifang Du, Xin Huang, Yu Sun, Junting Wang, Huan Tao, Kang Xu, Cheng Li, Yang Chen, Hebing Chen, Xiaochen Bo:
Spatial density of open chromatin: an effective metric for the functional characterization of topologically associated domains. Briefings Bioinform. 22(3) (2021) - 2020
- [j6]Hebing Chen, Zhuo Zhang, Shuai Jiang, Ruijiang Li, Wanying Li, Chenghui Zhao, Hao Hong, Xin Huang, Hao Li, Xiaochen Bo:
New insights on human essential genes based on integrated analysis and the construction of the HEGIAP web-based platform. Briefings Bioinform. 21(4): 1397-1410 (2020) - [j5]Hao Hong, Shuai Jiang, Hao Li, Guifang Du, Yu Sun, Huan Tao, Cheng Quan, Chenghui Zhao, Ruijiang Li, Wanying Li, Xiaoyao Yin, Yangchen Huang, Cheng Li, Hebing Chen, Xiaochen Bo:
DeepHiC: A generative adversarial network for enhancing Hi-C data resolution. PLoS Comput. Biol. 16(2) (2020)
2010 – 2019
- 2019
- [j4]Zhuo Zhang, Hao Li, Shuai Jiang, Ruijiang Li, Wanying Li, Hebing Chen, Xiaochen Bo:
A survey and evaluation of Web-based tools/databases for variant analysis of TCGA data. Briefings Bioinform. 20(4): 1524-1541 (2019) - [j3]Xin Huang, Xudong Gao, Wanying Li, Shuai Jiang, Ruijiang Li, Hao Hong, Chenghui Zhao, Pingkun Zhou, Hebing Chen, Xiaochen Bo, Hao Li:
Stable H3K4me3 is associated with transcription initiation during early embryo development. Bioinform. 35(20): 3931-3936 (2019) - 2017
- [j2]Hebing Chen, Shuai Jiang, Zhuo Zhang, Hao Li, Yiming Lu, Xiaochen Bo:
Exploring spatially adjacent TFBS-clustered regions with Hi-C data. Bioinform. 33(17): 2611-2614 (2017) - [j1]Yiming Lu, Cheng Quan, Hebing Chen, Xiaochen Bo, Chenggang Zhang:
3DSNP: a database for linking human noncoding SNPs to their three-dimensional interacting genes. Nucleic Acids Res. 45(Database-Issue): D643-D649 (2017)
Coauthor Index
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