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Rare cells discovery, Single cell RNA-seq data, Isolation Forest

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Apr 21, 2019
2b26195 · Apr 21, 2019

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DoRC

DoRC is the abbreviation of Discovery of Rare Cells (DoRC), in the cost of minutes, from ultra-large scRNA-seq data.

Requirements of Python (version 3.7.1) packages

thanks for all the authors' work!

Run

  • run_dorc_68k_all.py: script for running DoRC in the pbmcs_68k dataset, which consists of 68579 PBMCs (www.10xgenomics.com)
  • run_fire_68k_all.py: the same above but with FiRE instead.

Issues

Any question, please do not hesitate to contact me with chenxofhit@gmail.com, or submit issues here.

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