ConKit: a python interface to contact predictions
F Simkovic, JMH Thomas, DJ Rigden - Bioinformatics, 2017 - academic.oup.com
F Simkovic, JMH Thomas, DJ Rigden
Bioinformatics, 2017•academic.oup.comRecent advances in protein residue contact prediction algorithms have led to the emergence
of many new methods and a variety of file formats. We present ConKit, an open source,
modular and extensible Python interface which allows facile conversion between formats
and provides an interface to analyses of sequence alignments and sets of contact
predictions. Availability and Implementation ConKit is available via the Python Package
Index. The documentation can be found at http://www. conkit. org. ConKit is licensed under …
of many new methods and a variety of file formats. We present ConKit, an open source,
modular and extensible Python interface which allows facile conversion between formats
and provides an interface to analyses of sequence alignments and sets of contact
predictions. Availability and Implementation ConKit is available via the Python Package
Index. The documentation can be found at http://www. conkit. org. ConKit is licensed under …
Summary
Recent advances in protein residue contact prediction algorithms have led to the emergence of many new methods and a variety of file formats. We present ConKit, an open source, modular and extensible Python interface which allows facile conversion between formats and provides an interface to analyses of sequence alignments and sets of contact predictions.
Availability and Implementation
ConKit is available via the Python Package Index. The documentation can be found at http://www.conkit.org. ConKit is licensed under the BSD 3-Clause.
Supplementary information
Supplementary data are available at Bioinformatics online.
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