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isabl_cli Public
Forked from papaemmelab/isabl_cli🤖 isabl Command Line Client and SDK.
Python Other UpdatedDec 4, 2025 -
TelomereHunter Public
Forked from linasieverling/TelomereHunterEstimating telomere content from genome sequencing data
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destruct Public
Accurate Rearrangement Detection using Breakpoint Specific Realignment
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ijson Public
Forked from ICRAR/ijsonIterative JSON parser with Pythonic interfaces
Python Other UpdatedJan 2, 2025 -
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remixt Public
Clone-specific genomic structure estimation in cancer
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pyro_tutorial Public
A tutorial on the basics of the pyro probabilistic programming language
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genevector Public
Forked from nceglia/genevectorVector representations of gene co-expression in single cell RNAseq.
Python MIT License UpdatedOct 11, 2022 -
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SCICoNE Public
Forked from cbg-ethz/SCICoNESingle-cell copy number calling and event history reconstruction.
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oncokb-annotator Public
Forked from oncokb/oncokb-annotatorAnnotates variants in MAF with OncoKB annotation.
Python GNU Affero General Public License v3.0 UpdatedAug 11, 2021 -
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gGnome Public
Forked from mskilab-org/gGnomeR API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework
R MIT License UpdatedMay 15, 2021 -
wgs-sample-qc-env-setup Public
Forked from DouglasAbrams/wgs-sample-qc-env-setupUpdatedMar 12, 2021 -
defuse Public
An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data
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sv_genotyping_hackathon Public
Forked from DouglasAbrams/sv_genotyping_hackathonhackathon project for single cell structural variant genotyping
UpdatedMay 13, 2020 -
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citup Public
Clonality inference in multiple tumor samples using phylogeny
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedJun 6, 2017 -
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