A repository run by the US CDC to collect forecasts of incident COVID-19 hospital admissions and emergency department visits.

An extension of LightGBM to probabilistic modelling

SuperEasy 100% Local RAG with Ollama + Email RAG

Grok open release

A fast, distributed, high performance gradient boosting (GBT, GBDT, GBRT, GBM or MART) framework based on decision tree algorithms, used for ranking, classification and many other machine learning …

A python library for user-friendly forecasting and anomaly detection on time series.

Private chat with local GPT with document, images, video, etc. 100% private, Apache 2.0. Supports oLLaMa, Mixtral, llama.cpp, and more. Demo: https://gpt.h2o.ai/ https://gpt-docs.h2o.ai/

Review lecture of Biostats and Epi for the USMLE Step 1

FluSight Forecast Submissions

Simulation of the AD3 mutation in synaptotagmin C2A

Links to code for inferring who infected whom

Data repository of publicly available Zika data

data for manuscript

Create, edit and display a journal article, entirely in GitHub

Code and data for PPI simulation part of Kachroo et al., Systematic humanization of yeast genes reveals conserved functions and genetic modularity. Science 348:921–925, 2015

Code and data for Shahmoradi et al., Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design, J. Mol. Evol. 79:130–142 (2014).

Code and data for Sridhara et al., Predicting growth conditions from internal metabolic fluxes in an in-silico model of E. coli, PLOS ONE 9:e114608 (2014).

A fast C++ API for simulating the spread of epidemics on contact networks.