docker build . -t uadbm:local
docker run --rm -v <abspath-to-home>/content/data/Brainweb/lesions/severe:/input -v <abspath-to-home>/man:/output uadbm:local --nii /input/t2_ai_msles2_1mm_pn5_rf40.nii.gz --outdir /output
run this script in container:
from utils.brainweb_download import download_brainweb_dataset
from pathlib import Path
download_brainweb_dataset(
base_dir=Path('./content/data/Brainweb'),
name="",
institution="",
email=""
)