Theoretical biophysicist with a focus on MD simulations and nonequilibrium statistical mechanics.
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University of Freiburg, Germany
- Freiburg, DE
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tutorial_dcTMD Public
Tutorial for the usage of the dcTMD approach and Langevin simulations employing the trypsin-benzamidine complex as example.
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2Dmodel_path_analysis Public
Jupyter notebook with 2D test potential energy landscape for performing model biased simulations combined with pathway analysis.
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Langevin_T_boost Public
Forked from benlickert/Langevin_T_boostIncludes C++ code to run Markovian Langevin equations in units compatible with the dcTMD correction scripts available at www.moldyn.uni-freiburg.de/software/software.html. In addition, a jupyter no…
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dcTMD_scripts_v1.0 Public
Python scripts for the application of dissipation-corrected targeted molecular dynamics analysis.