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| # Seurat v3.2.3 | ||
| # Seurat v4.0.0 | ||
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| ## Test environments | ||
| * local Ubuntu 16.04.6 install, R 3.6.1 | ||
| * local Ubuntu 18.04.4 install, R 4.0.1 | ||
| * local Ubuntu 20.04 install, R 4.0.2 | ||
| * local Windows 10 install, R 4.0.0 | ||
| * local Ubuntu 16.04.6 install, R 4.0.3 | ||
| * local Ubuntu 18.04.4 install, R 4.0.3 | ||
| * local Ubuntu 20.04 install, R 4.0.3 | ||
| * local Windows 10 install, R 4.0.3 | ||
| * Ubuntu 16.04.6 (on travis-ci), R 4.0.0, R devel | ||
| * macOS 10.13.6 (on travis-ci), R 4.0.2 | ||
| * Windows Server 2012 R2 (on AppVeyor), R 4.0.2 Patched | ||
| * win-builder (oldrelease, release, devel) | ||
| * win-builder (release, devel) | ||
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| ## R CMD check results | ||
| There were no ERRORs or WARNINGs | ||
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| There were 3 NOTEs: | ||
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| * checking CRAN incoming feasibility ... NOTE | ||
| Maintainer: ‘Paul Hoffman <[email protected]>’ | ||
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| Suggests or Enhances not in mainstream repositories: | ||
| loomR | ||
| Availability using Additional_repositories specification: | ||
| loomR yes https://mojaveazure.github.io/loomR | ||
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| The package we suggest, loomR, is currently under development and not yet available on CRAN. This package is not required for core functionality of Seurat. | ||
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| * checking package dependencies ... NOTE | ||
| Package suggested but not available for checking: 'loomR' | ||
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| loomR is a suggested package hosted on a custom repository and maintained by us (both the package and repository). | ||
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| * checking Rd cross-references ... NOTE | ||
| Package unavailable to check Rd xrefs: 'loomR' | ||
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| This is a suggested package that we maintain. We have checked the cross references to ensure they link to the correct help pages. | ||
| There were no ERRORs, WARNINGs, or NOTEs | ||
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| ## Downstream dependencies | ||
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| There is one package that depends on Seurat: tidyseurat; this update does not impact its functionality | ||
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| There are three packages that imports Seurat: scMappR, Signac, and SoupX; this update does not impact their functionality | ||
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| There are eight packages that suggest Seurat: BisqueRNA, clustree, DIscBIO, nanny, Rmagic, scSorter, singleCellHaystack, treefit; this update does not impact their functionality. | ||
| There are ten packages that suggest Seurat: BisqueRNA, clustree, DIscBIO, nanny, rliger, Rmagic, scSorter, singleCellHaystack, treefit, VAM; this update does not impact their functionality. |