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  1. scrublet scrublet Public

    Forked from AllonMKlein/scrublet

    Detect doublets in single-cell RNA-seq data

    Jupyter Notebook

  2. single-cell-tutorial single-cell-tutorial Public

    Forked from theislab/single-cell-tutorial

    Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

    Jupyter Notebook

  3. snRNAseq_eWAT snRNAseq_eWAT Public

    Forked from JesperGrud/snRNAseq_eWAT

    Scripts for analysis of primary and supplementary snRNA-seq datasets from epididymal white adipose tissue from lean and obese mice.

  4. MAST MAST Public

    Forked from RGLab/MAST

    Tools and methods for analysis of single cell assay data in R

    R

  5. SCTransformPy SCTransformPy Public

    Forked from atarashansky/SCTransformPy

    A python port of the R package SCTransform:

    Jupyter Notebook

  6. scanpy scanpy Public

    Forked from scverse/scanpy

    Single-Cell Analysis in Python. Scales to >1M cells.

    Python