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Commits on Apr 15, 2019

• Update pbmc_small to latest v3 standards

  mojaveazure

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Commits on Apr 13, 2019

• ensure checks pass on R devel

  andrewwbutler

  committed
  232aacf

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Commits on Apr 9, 2019

• cleaner test output

  andrewwbutler

  committed
  327bf49

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• forgot to change name in test

  andrewwbutler

  committed
  1642370

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• minor style fixes

  andrewwbutler

  committed
  e49d9bb

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Commits on Apr 8, 2019

• Let RunPCA report total variance

  zeehio

  committed
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Commits on Apr 4, 2019

• make sure tests pass with forced name uniqueness

  andrewwbutler

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Commits on Mar 25, 2019

• Rename file to be consistent with others in test suite

  

  Paul Hoffman

  committed
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Commits on Mar 21, 2019

• Pass is_distance when distance.matrix is set

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  chenyenchung

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  13801ec

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Commits on Jan 3, 2019

• Run LogNormalize and ScaleData quietly

  

  Paul Hoffman

  committed
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Commits on Dec 13, 2018

• Set assay = RNA by default in CreateDimReducObject

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  andrewwbutler

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Commits on Dec 10, 2018

• Fixes to NormalizeData

  

  Paul Hoffman

  committed
  4ea549e

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Commits on Dec 6, 2018

• Merge branch 'release/3.0' of github.com:satijalab/seurat-private into release/3.0

  andrewwbutler

  committed
  5e8c343

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• add a couple of Assay creation tests

  andrewwbutler

  committed
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Commits on Dec 3, 2018

• consistent filtering in CreateAssayObject (addresses satijalab#947)

  andrewwbutler

  committed
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• handle zero variance features properly when scaling (addresses satijalab#979)

  andrewwbutler

  committed
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Commits on Nov 29, 2018

• add tests for relative count normalization, change cat to message

  andrewwbutler

  committed
  3e165a6

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• add missing tests for data_manipulation code

  andrewwbutler

  committed
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Commits on Nov 14, 2018

• Merge branch 'cellranger3.0' into release/3.0

  evolvedmicrobe

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Commits on Nov 3, 2018

• convert sparse matrices in Read10X to dgCMatrix (satijalab#913)

  andrewwbutler

  committed
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Commits on Oct 30, 2018

• add new integration method

  andrewwbutler

  committed
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Commits on Oct 21, 2018

• set key when merging assays that all have the same key, add key to Assays in merge.Seurat properly

  andrewwbutler

  committed
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Commits on Oct 17, 2018

• Changes to CreateDimReducObject

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  Paul Hoffman

  committed
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Commits on Oct 15, 2018

• more useful warnings/error messages for fetching data, first few FetchData tests

  andrewwbutler

  committed
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Commits on Oct 11, 2018

• make Assay merging more robust

  andrewwbutler

  committed
  6b7bbc2

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• tests for CreateSeuratObject, run docs

  andrewwbutler

  committed
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Commits on Oct 2, 2018

• documentation for CreateDimReducObject, add additional checks/tests

  andrewwbutler

  committed
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• check for NULL col/rownames when creating Assay objects, add tests

  andrewwbutler

  committed
  686b1e6

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• minor test fix

  andrewwbutler

  committed
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• tests for adding feature level metadata

  andrewwbutler

  committed
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• add tests for AddMetaData, don't allow metadata columns with the same name as Assays or DimReducs

  andrewwbutler

  committed
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Commits on Oct 1, 2018

• update preprocessing tests

  andrewwbutler

  committed
  5519b22

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• remove unused functions from data_manipulation, update tests

  andrewwbutler

  committed
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Commits on Sep 13, 2018

• don't allow features to be set as variable if they have 0 mean

  andrewwbutler

  committed
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Commits on Aug 31, 2018

• Get [[.Seurat and [[<-.Seurat working

  

  Paul Hoffman

  committed
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