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  • cv Public

    Curriculum vitæ, html→pdf generation

    HTML Updated Jan 20, 2025
  • A HTML5/ES6 implementation of a renderer for iReal Pro playlists

    JavaScript MIT License Updated Jan 6, 2025
  • Beautiful toolbox for jsdoc generated documentation - with 'typescript', `category` and `component` plugins

    JavaScript MIT License Updated Jan 5, 2025
  • HTML Updated Sep 16, 2024
  • cellrank Public

    Forked from theislab/cellrank

    CellRank: dynamics from multi-view single-cell data

    Python BSD 3-Clause "New" or "Revised" License Updated Aug 30, 2024
  • morpheus.js Public

    Forked from cmap/morpheus.js

    JavaScript matrix visualization and analysis

    JavaScript BSD 3-Clause "New" or "Revised" License Updated Aug 1, 2024
  • add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.

    Python Other Updated Feb 14, 2024
  • spectra Public

    Forked from dpeerlab/spectra

    Supervised Pathway DEConvolution of InTerpretable Gene ProgRAms

    Python MIT License Updated Jan 17, 2024
  • Jupyter Notebook Updated Jan 8, 2024
  • condot Public

    Forked from szczurek-lab/condot

    Supervised Training of Conditional Monge Maps

    Jupyter Notebook MIT License Updated Oct 20, 2023
  • notebooks Public

    Collection of random jupyter notebooks

    Jupyter Notebook Updated Sep 14, 2023
  • renv Public

    Forked from rstudio/renv

    renv: Project environments for R.

    R MIT License Updated Jul 10, 2023
  • Website hosted at https://openproblems.bio

    TeX Creative Commons Attribution 4.0 International Updated Jul 7, 2023
  • plan Public

    JavaScript Updated May 8, 2023
  • Formalizing and benchmarking open problems in single-cell genomics

    Jupyter Notebook 1 MIT License Updated Apr 16, 2023
  • hood Public

    Updated Apr 12, 2023
  • scFormer Public

    Forked from bowang-lab/scFormer
    Python MIT License Updated Apr 6, 2023
  • scanpy Public

    Forked from scverse/scanpy

    Single-cell analysis in Python. Scales to >1M cells.

    Python BSD 3-Clause "New" or "Revised" License Updated Feb 15, 2023
  • Jupyter Notebook Updated Dec 23, 2022
  • Python pipeline and Javascript scatter plot library for single-cell datasets

    JavaScript GNU General Public License v3.0 Updated Jul 5, 2022
  • Python for data science course

    JavaScript Updated May 19, 2022
  • worrybot Public

    Updated Mar 23, 2022
  • abot Public

    Forked from mr0rng/abot
    TypeScript Updated Mar 12, 2022
  • CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

    Python BSD 3-Clause "New" or "Revised" License Updated Nov 12, 2021
  • press Public

    Scriptable markup language for PDF generation

    Python Updated Jun 29, 2021
  • ibex Public

    Forked from addrummond/ibex

    Psycholinguistic experiments online

    JavaScript Other Updated Mar 13, 2021
  • JavaScript Updated Jan 25, 2021
  • scarches Public

    Forked from theislab/scarches

    architecture surgery and transfer learning for single-cell

    Jupyter Notebook Updated Jan 5, 2021
  • Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

    MIT License Updated Feb 17, 2020
  • dsn-intro Public

    Jupyter Notebook Updated Jan 28, 2020