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CellTypeCompositionAnalysis Public
Forked from natsuhiko/CellTypeCompositionAnalysisR UpdatedMay 19, 2021 -
cellsnp-lite Public
Forked from single-cell-genetics/cellsnp-liteEfficient genotyping bi-allelic SNPs on single cells
C Apache License 2.0 UpdatedApr 13, 2021 -
emptydrops Public
Python implementation of emptydrops() in CellRanger v3.0.2
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staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedJun 10, 2020 -
ngs-utils Public
Common utilities for NGS analysis
Python GNU General Public License v3.0 UpdatedMar 11, 2020 -
scanpy-scripts Public
Forked from ebi-gene-expression-group/scanpy-scriptsScripts for using scanpy
Python MIT License UpdatedApr 17, 2019 -
conda Public
Forked from conda/condaOS-agnostic, system-level binary package manager and ecosystem
Python Other UpdatedApr 9, 2019 -
r-optparse Public
Forked from trevorld/r-optparseR package providing a commandline optional argument parser
R GNU General Public License v2.0 UpdatedApr 3, 2019 -
SC3 Public
Forked from hemberg-lab/SC3A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments
R GNU General Public License v3.0 UpdatedMar 2, 2019 -
bioconda-recipes Public
Forked from ebi-gene-expression-group/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedFeb 14, 2019 -
seurat Public
Forked from satijalab/seuratR toolkit for single cell genomics
R GNU General Public License v3.0 UpdatedFeb 7, 2019 -
anndata Public
Forked from scverse/anndataAnnotated data.
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 30, 2019 -
scg_lib_structs Public
Forked from Teichlab/scg_lib_structsCollections of library structure and sequence of popular single cell genomic methods
HTML UpdatedJan 9, 2019 -
multi-package-containers Public
Forked from BioContainers/multi-package-containersTesting building mulled containers for multi-requirement tools.
UpdatedDec 11, 2018 -
container-galaxy-sc-tertiary Public
Forked from ebi-gene-expression-group/container-galaxy-sc-tertiaryGalaxy container for single cell RNA-Seq tertiary analysis tools
HTML MIT License UpdatedDec 11, 2018 -
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tools-iuc Public
Forked from galaxyproject/tools-iucTool Shed repositories maintained by the Intergalactic Utilities Commission
HTML MIT License UpdatedNov 19, 2018 -
hicPipe Public
Map and process pair-end C-seq reads
Python GNU General Public License v3.0 UpdatedAug 1, 2018 -
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treecall Public
Tree-based joint lineage inference and somatic mutation calling
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juicebox Public
Forked from aidenlab/JuiceboxLegacySoftware for visualizing data from Hi-C and other proximity mapping experiments
Java MIT License UpdatedFeb 18, 2017 -
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cross-sampler Public
read sampler for ngs data
C++ GNU General Public License v2.0 UpdatedApr 6, 2015
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