CAINTOR,

Colocaliation, Annotation, Integrator. Extends PAINTOR to provide the functionality of pw-gwas in the PAINTOR framework.

PAINTOR_V3.0

WARNING BETA VERSION! Detailed repository with FAQ's, instruction manual, and annotation database coming soon!

Input formats same as v2.1.

Installation (requires gcc v4.9+ to install)

Quick Start for flags:

./PAINTOR

Name	Name	Last commit message	Last commit date
Latest commit theboocock Jun 25, 2016 3ee6a72 · Jun 25, 2016 History 25 Commits
PAINTOR_Utilities	PAINTOR_Utilities	Drop Monomorphic SNPs	May 27, 2016
SampleData	SampleData	Final Sample files	May 23, 2016
eigen	eigen	Added required eigen library	Jan 25, 2016
CMakeLists.txt	CMakeLists.txt	Release Candidate	Apr 8, 2016
Functions_CoreModel.cpp	Functions_CoreModel.cpp	First COTOR commit	Jun 25, 2016
Functions_CoreModel.h	Functions_CoreModel.h	Release Candidate	Mar 30, 2016
Functions_IO.cpp	Functions_IO.cpp	First COTOR commit	Jun 25, 2016
Functions_IO.h	Functions_IO.h	First COTOR commit	Jun 25, 2016
Functions_Optimize.cpp	Functions_Optimize.cpp	First COTOR commit	Jun 25, 2016
Functions_Optimize.h	Functions_Optimize.h	First COTOR commit	Jun 25, 2016
Makefile	Makefile	First commit	Jan 21, 2016
README.md	README.md	Update README.md	Jun 22, 2016
main.cpp	main.cpp	First COTOR commit	Jun 25, 2016