Open Source C# Data Visualization Software

PANDA is a comprehensive and flexib tool for quantitative proteomics data analysis, which is developed based on our solid foundations in quantitative proteomics for years. Several novelties have been implemented in it. First, we implement the advantage algorithms of LFQuant (Proteomics 2012, 12, (23-24), 3475-84) and SILVER (Bioinformatics 2014, 30, (4), 586-7) into PANDA. Second, we consider the state-of-art concept of quantification reliability in this quantitative workflow. On the levels of spectra, peptides and proteins, PANDA works out a few quantitative filters and new scores for quantification confidence. Third, PANDA is designed for processing proteomics big data in parallel.

To give users the full control over the running application. This means that an application is working according to its purpose but the control over the whole interface is taken from developer and given to users. While an application is running, users can move, resize, and tune all the screen objects through which the communication with an application is going. Set of files includes the book (both in DOC and PDF formats), a big demonstration project with all its files available (all the source files are in C#), and an additional description of many used classes. Book uses the examples from the demo project to explain everything in details. The examples are from many different areas. Examples from the first part of the book are aimed at the details of algorithm and its use with different objects; examples from the second part are mostly the real and very useful applications.

This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.