Open Source MATLAB Simulation Software

Development of new data assimilation techniques for ocean models

Folder is a tool to simulate and analyse the development of structures in mechanically layered media during layer parallel shortening or extension. It includes a graphical user interface that allows for easy designing of complex geometrical models, defining material parameters (including linear and non-linear rheology), and specifying type and amount of deformation. It also includes a range of features that facilitate the visualization and examination of various relevant quantities e.g. velocities, stress, rate of deformation, pressure, and finite strain. Folder contains a separate application, which illustrates analytical solutions of growth rate spectra for buckling and necking of a single viscous layer. Check out the companion paper: doi:10.1016/j.jsg.2016.01.001

These classes are useful for signal processing in Matlab or C++. They bring together tools and methods which may be used interchangeably for Matlab and C++. Their initial use is in conjunction with work towards my degree at UC Berkeley.

A Matlab/GNU Octave package for dynamic box models with any number of species and compartments. Box models are useful to study the dynamics of chemicals within systems that can be described by different compartments (e.g. environmental systems).

A matlab/octave based reaction transport model describing microbially mediated isotope fractionation processes in porous media.