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Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
Cython bindings and Python interface to HMMER3.
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.
Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.
Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.
Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.
Cython bindings and Python interface to SWORD (Smith Waterman On Reduced Database), a heuristic method for fast database search.