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Fast and accurate Phylogeny estimation with self-attention Networks
Cdbgtricks is a modular tool for updating a compacted de Bruijn Graph.
Kun-peng: an ultra-fast, low-memory footprint and accurate taxonomy classifier for all
A gap-closing software tool that uses long reads to enhance genome assembly.
giuliaguidi / gguidi-website
Forked from pmichaillat/hugo-websiteMinimalist Hugo template for academic websites
jianshu93 / bindash
Forked from zhaoxiaofei/bindashFast and precise comparison of genomes and metagenomes (in the order of terabytes) on a typical personal laptop
Parallel Construction of Suffix Arrays in Rust
Pipeline for analyzing (rare) mutations in metagenome-assembled genomes
A k-mer search engine for all Sequence Read Archive public accessions
Fast Approximate Membership Filters (C++)
Automated strain separation of low-complexity metagenomes
MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs
Rust cache structures and easy function memoization
Official home of genome aligner based upon notion of Cactus graphs
Spectral library searching using approximate nearest neighbor techniques.
A napari plugin to process and analyse images with chatGPT!
indels and complex variants prediction from SKA skf files
A fast, AVX2 and ARM Neon accelerated FM index library
Rust port of Spice, a low-overhead parallelization library