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Showing results
R 25 1 Updated Jan 2, 2025

collection of notebooks with different cytoscape workflows

HTML 49 36 Updated Mar 22, 2023
R 74 9 Updated Feb 4, 2024

Plotting scripts for long read sequencing data

Python 457 48 Updated Feb 1, 2025

Parallel S3 and local filesystem execution tool.

Go 2,865 251 Updated Jan 17, 2025

Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors

Jupyter Notebook 36 2 Updated May 25, 2024

R package MatchIt

R 216 42 Updated Jan 12, 2025

R package that helps create and export ggplot2 charts in the style used by the BBC News data team

R 1,574 269 Updated Jul 2, 2021

Code to calculate regional missense constraint

Python 13 1 Updated Sep 18, 2024

Easy single cell analysis platform for enrichment

R 159 20 Updated Jan 29, 2025

A tool that lets you quickly flip through images in a local directory and record notes or answer questions about each one.

Python 19 Updated Feb 5, 2025

A tool for pulling singularity images in HPC environments.

Python 4 1 Updated Jan 28, 2020

Find causal cell-types underlying complex trait genetics

R 79 31 Updated Oct 4, 2024

Enrichment Networks for Pathway Enrichment Analysis

R 41 9 Updated Apr 14, 2023

An R package designed to demultiplex cell hashing data

R 27 8 Updated Feb 5, 2025

https://mdogucu.github.io/teach-tidyverse

HTML 10 Updated Dec 15, 2021

R wrapper for Spotify's Web API

R 373 68 Updated Oct 24, 2024
Jupyter Notebook 6 8 Updated Aug 4, 2021

Visualize your Google Location History using an interactive heatmap

JavaScript 915 231 Updated Jul 17, 2023

A collection of reusable WDL tasks. Category:Other

WDL 85 29 Updated Feb 5, 2025

WDL Analysis Research Pipelines

WDL 207 100 Updated Feb 7, 2025

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Java 994 372 Updated Feb 5, 2025

Tutorials about computational chemistry

SCSS 12 2 Updated Sep 22, 2024

Results browsers for case-control studies of psychiatric diseases done at the Broad Institute

JavaScript 11 4 Updated Feb 7, 2025

Walking through the analysis and a figure from a Nature Genetics article, replicating the lab's findings that mutations in genes are enriched based on specific exposures. || Data 202 Final Project,…

HTML 1 Updated Jan 9, 2021

R & stats illustrations by @allison_horst

1,819 201 Updated Oct 16, 2022