Lists (32)
AI
Algorithm
AlphaFold
ATAC-seq
ChIP-seq
Conda
DAP-seq
Evolution
Gadgets
Genomic analysis
Git
Hi-C
IDE
Image analysis
Jupyter
Linux
MNase-seq
Nanopore
Plots
polyA
Python packages
R packages
RNA-seq
Single-cell
sRNA-seq
Terminal
Transposons
Web application
Web development
WGBS
Windows
zsh
Stars
Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media
Jupyter notebooks for the code samples of the book "Deep Learning with Python"
wtfpython的中文翻译/持续🚧.../ 能力有限，欢迎帮我改进翻译
The "Python Machine Learning (1st edition)" book code repository and info resource
Notebooks and code for the book "Introduction to Machine Learning with Python"
Book_1_《编程不难》 | 鸢尾花书：从加减乘除到机器学习；请多多批评指正！
【🔞🔞🔞 内含不适合未成年人阅读的图片】基于我擅长的编程、绘画、写作展开的 AI 探索和总结：StableDiffusion 是一种强大的图像生成模型，能够通过对一张图片进行演化来生成新的图片。ChatGPT 是一个基于 Transformer 的语言生成模型，它能够自动为输入的主题生成合适的文章。而 Github Copilot 是一个智能编程助手，能够加速日常编程活动。
Cool Python features for machine learning that I used to be too afraid to use. Will be updated as I have more time / learn more.
100 data puzzles for pandas, ranging from short and simple to super tricky (60% complete)
Making Protein folding accessible to all!
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
Jupyter notebooks and other resources for Think Python by Allen Downey, published by O'Reilly Media.
Biological foundation modeling from molecular to genome scale
Jupyter widget to interactively view molecular structures and trajectories
https://www.sc-best-practices.org
Hands-on Exploratory Data Analysis with Python, published by Packt
A library for creating complex UpSet plots with ggplot2 geoms
Materials for short, half-day workshops
NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.
A Jupyter Server Extension Providing Support for Y Documents
Long read production pipelines
Efficient and precise single-cell reference atlas mapping with Symphony
SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances
Signal based nanopore RNA demultiplexing with convolutional neural networks
Prediction of RNA modifications and their stoichiometry from per-read features: current intensity, dwell time and trace (Begik*, Lucas* et al., Nature Biotech 2021)