Lists (32)
AI
4 repositories
Algorithm
7 repositories
AlphaFold
11 repositories
ATAC-seq
3 repositories
ChIP-seq
5 repositories
Conda
1 repository
DAP-seq
1 repository
Evolution
1 repository
Gadgets
7 repositories
Genomic analysis
9 repositories
Git
1 repository
Hi-C
7 repositories
IDE
4 repositories
Image analysis
1 repository
Jupyter
2 repositories
Linux
5 repositories
MNase-seq
2 repositories
Nanopore
6 repositories
Plots
20 repositories
polyA
2 repositories
Python packages
12 repositories
R packages
5 repositories
RNA-seq
3 repositories
Single-cell
3 repositories
sRNA-seq
2 repositories
Terminal
2 repositories
Transposons
8 repositories
Web application
3 repositories
Web development
3 repositories
WGBS
Windows
4 repositories
zsh
2 repositories
Stars
3
stars
written in Nextflow
Clear filter
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
Pipeline to call hyper and hypo accessible nucleosomes and nucleosomes with non-canonical structure based on differential MNase-seq data